@article {hanselmann_12_active,
	title = {Active Learning for Convenient Annotation and Classification of Secondary Ion Mass Spectrometry Images},
	journal = {Analytical Chemistry},
	volume = {85 (1)},
	year = {2012},
	note = {1},
	pages = {147-155},
	doi = {10.1021/ac3023313},
	author = {Hanselmann, M. and R{\"o}der, J. and Ullrich K{\"o}the and B. Y. Renard and Heeren, R. M. A. and Fred A. Hamprecht}
}
@article {renard_12_overcoming,
	title = {Overcoming species boundaries in peptide identification with BICEPS},
	journal = {Molecular and Cellular Proteomics},
	volume = {11},
	year = {2012},
	doi = {10.1074/mcp.M111.014167},
	author = {B. Y. Renard and Xu, B. and Kirchner, M. and Zickmann, F. and Winter, D. and Korten, S. and Brattig, N. and Tzur, A. and Fred A. Hamprecht and Steen, H.}
}
@article {hanselmann_11_sima,
	title = {SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists},
	journal = {Bioinformatics},
	volume = {27 (7)},
	year = {2011},
	note = {1},
	pages = {987-993},
	doi = {10.1093/bioinformatics/btr051},
	author = {Hanselmann, M. and Bj{\"o}rn Voss and B. Y. Renard and Lindner, M. and Ullrich K{\"o}the and Kirchner, M. and Fred A. Hamprecht}
}
@article {kirchner_10_computational,
	title = {Computational Protein Profile Similarity Screening for Quantitative Mass Spectrometry Experiments},
	journal = {Bioinformatics},
	volume = {26 (1)},
	year = {2010},
	note = {1},
	pages = {77-83},
	doi = {10.1093/bioinformatics/btp607},
	author = {Kirchner, M. and B. Y. Renard and Ullrich K{\"o}the and Pappin, D. J. and Fred A. Hamprecht and Judith A. J. Steen and Steen, H.}
}
@article {lou_10_deuteration,
	title = {Deuteration Distribution Estimation with Improved Sequence Coverage for HX/MS Experiments},
	journal = {Bioinformatics},
	volume = {26(12)},
	year = {2010},
	note = {1},
	pages = {1535-1541},
	doi = {10.1093/bioinformatics/btq165},
	author = {Lou, X. and Kirchner, M. and B. Y. Renard and Ullrich K{\"o}the and Graf, C. and Lee, C. and Judith A. J. Steen and Steen, H. and Mayer, M. P. and Fred A. Hamprecht}
}
@article {renard_10_estimating,
	title = {Estimating the Confidence of Peptide Identifications without Decoy Databases},
	journal = {Analytical Chemistry},
	year = {2010},
	note = {1},
	pages = {4314-4318},
	doi = {10.1021/ac902892j},
	author = {B. Y. Renard and Timm, W. and Kirchner, M. and Judith A. J. Steen and Fred A. Hamprecht and Steen, H.}
}
@phdthesis {renard_10_robust,
	title = {Robust Methods for the Proteomic Data Analysis Pipeline},
	year = {2010},
	publisher = {University of Heidelberg},
	author = {B. Y. Renard}
}
@article {ozlu_09_binding,
	title = {Binding partner switching on microtubules and aurora-B in the mitosis to cytokinesis transition},
	journal = {Molecular \& Cellular Proteomics},
	year = {2009},
	note = {1},
	doi = {10.1074/mcp.M900308-MCP200},
	author = {Ozlu, N. and Monigatti, F. and B. Y. Renard and Field, C. M. and Steen, H. and Mitchison, T. J. and Judith Jebanthirajah Steen}
}
@conference {hanselmann_09_multivariate,
	title = {Multivariate Watershed Segmentation of Compositional Data},
	booktitle = {Proceedings of the 15th International Conference on Discrete Geometry for Computer Imagery (DGCI), in press},
	volume = {5810},
	year = {2009},
	note = {1},
	pages = {180-192},
	publisher = {Springer},
	organization = {Springer},
	doi = {10.1007/978-3-642-04397-0},
	author = {Hanselmann, M. and Ullrich K{\"o}the and B. Y. Renard and Kirchner, M. and Heeren, R. M. A. and Fred A. Hamprecht}
}
@article {hanselmann_09_towards,
	title = {Towards Digital Staining using Imaging Mass Spectrometry and Random Forests},
	journal = {Journal of Proteome Research},
	volume = {8},
	year = {2009},
	note = {1},
	pages = {3558-3567},
	doi = {10.1021/pr900253y},
	author = {Hanselmann, M. and Ullrich K{\"o}the and Kirchner, M. and B. Y. Renard and Amstalden, E. R. and Glunde, K. and Heeren, R. M. A. and Fred A. Hamprecht}
}
@article {renard_09_when,
	title = {When Less Can Yield More - Computational Preprocessing of MS/MS Spectra for Peptide Identification Preprocessing},
	journal = {Proteomics},
	volume = {9},
	year = {2009},
	note = {1},
	pages = {4978-4984},
	doi = {10.1002/pmic.200900326},
	author = {B. Y. Renard and Kirchner, M. and Monigatti, F. and Ivanov, A. R. and Rappsilber, J. and Winter, D. and Judith A. J. Steen and Fred A. Hamprecht and Steen, H.}
}
@article {hanselmann_08_concise,
	title = {Concise Representation of MS Images by Probabilistic Latent Semantic Analysis},
	journal = {Analytical Chemistry},
	volume = {80},
	number = {24},
	year = {2008},
	note = {1},
	pages = {9649-9658},
	doi = {10.1021/ac801303x},
	author = {Hanselmann, M. and Kirchner, M. and B. Y. Renard and Amstalden, E. R. and Glunde, K. and Heeren, R. M. A. and Fred A. Hamprecht}
}
@article {renard_08_nitpick,
	title = {NITPICK: Peak Identification for Mass Spectrometry Data},
	journal = {BMC Bioinformatics},
	volume = {9},
	year = {2008},
	pages = {355},
	doi = {10.1186/1471-2105-9-355},
	author = {B. Y. Renard and Kirchner, M. and Steen, H. and Judith A. J. Steen and Fred A. Hamprecht}
}
@mastersthesis {renard_07_improved,
	title = {An Improved Method for Peak Identification in Proteomic Mass Spectrometry Data},
	year = {2007},
	school = {University of Heidelberg},
	author = {B. Y. Renard}
}
