X.  Lou, Schiegg, M., and Hamprecht, F. A., ?Active Structured Learning for Cell Tracking: Algorithm, Framework and Usability?, IEEE Transactions on Medical Imaging, vol. 33 (4), pp. 849-860, 2014.

R.  Lindner, Lou, X., Reinstein, J., Shoeman, R. L., Hamprecht, F. A., and Winkler, A., ?Hexicon 2: Automated Processing of Hydrogen-Deuterium Exchange Mass Spectrometry Data with Improved Deuteration Distribution Estimation?, Journal of The American Society for Mass Spectrometry, vol. 25, pp. 1018-1028, 2014.

X.  Lou, Kloft, M., Rätsch, G., and Hamprecht, F. A., ?Structured Learning from Cheap Data?, Advanced Structured Prediction. The MIT Press, 2014.

X.  Lou and Hamprecht, F. A., ?Learning to Segment Dense Cell Nuclei with Shape Prior?, CVPR 2012. Proceedings, pp. 1012-1018, 2012.

X.  Lou, Fiaschi, L., Köthe, U., and Hamprecht, F. A., ?Quality Classification of Microscopic Imagery with Weakly Supervised Learning?, MICCAI-MLMI. Proceedings, pp. 176-183, 2012.

X.  Lou and Hamprecht, F. A., ?Structured Learning from Partial Annotations?, ICML 2012. Proceedings, 2012.

X.  Lou, ?Biomedical Data Analysis with Prior Knowledge: Modeling and Learning?. University of Heidelberg, 2011.

X.  Lou, Kaster, F. O., Lindner, M., Kausler, B. X., Köthe, U., Höckendorf, B., Wittbrodt, J., Jänicke, H., and Hamprecht, F. A., ?DELTR: Digital Embryo Lineage Tree Reconstructor?, in Eighth IEEE International Symposium on Biomedical Imaging (ISBI). Proceedings, 2011, pp. 1557-1560.

X.  Lou and Hamprecht, F. A., ?Structured Learning for Cell Tracking?, in NIPS 2011. Proceedings, 2011, pp. 1296-1304.

A.  Kreshuk, Stankiewicz, M., Lou, X., Kirchner, M., Hamprecht, F. A., and Mayer, M. P., ?Automated detection and analysis of bimodal isotope peak distribution in H/D exchange mass spectrometry using HeXicon?, International Journal of Mass Spectrometry, vol. 302, pp. 125-131, 2010.

X.  Lou, Kirchner, M., Renard, B. Y., Köthe, U., Graf, C., Lee, C., Steen, J. A. J., Steen, H., Mayer, M. P., and Hamprecht, F. A., ?Deuteration Distribution Estimation with Improved Sequence Coverage for HX/MS Experiments?, Bioinformatics, vol. 26(12), pp. 1535-1541, 2010.