A.  Kreshuk, Walecki, R., Köthe, U., Gierthmühlen, M., Plachta, D., Genoud, C., Haastert-Talini, K., and Hamprecht, F. A., ?Automated Tracing of Myelinated Axons and Detection of the Nodes of Ranvier in Serial Images of Peripheral Nerves?, Journal of Microscopy, vol. 259 (2), pp. 143-154, 2015.

N.  Krasowski, Beier, T., Knott, G. W., Köthe, U., Hamprecht, F. A., and Kreshuk, A., ?Improving 3D EM Data Segmentation by Joint Optimization over Boundary Evidence and Biological Priors?, in 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015, 2015, pp. 536-539.

C.  Cali, Baghabra, J., Boges, D. J., Holst, G. R., Kreshuk, A., Hamprecht, F. A., Srinivasan, M., Lehväslaiho, H., and Magistretti, P. J., ?Three-dimensional immersive virtual reality for studying cellular compartments in 3D models from EM preparations of neural tissues?, Journal of Comparative Neurology, vol. 524, pp. 23-38, 2015.

A.  Kreshuk, Funke, J., Cardona, A., and Hamprecht, F. A., ?Who is talking to whom: synaptic partner detection in anisotropic volumes of insect brain?, MICCAI. Proceedings, vol. LNCS 9349. Springer, pp. 661-668, 2015.

A.  Kreshuk, Köthe, U., Pax, E., Bock, D. D., and Hamprecht, F. A., ?Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks?, PLoS ONE, vol. 9, p. 2, 2014.

B.  Maco, Cantoni, M., Holtmaat, A., Kreshuk, A., Hamprecht, F. A., and Knott, G. W., ?Semiautomated Correlative 3D Electron Microscopy of In Vivo Imaged Axons and Dendrites?, Nature Protocols, vol. 9, pp. 1354-1366, 2014.

B.  Maco, Holtmaat, A., Cantoni, M., Kreshuk, A., Straehle, C. N., Hamprecht, F. A., and Knott, G. W., ?Correlative in vivo 2 photon and focused ion beam scanning electron microscopy of cortical neurons?, PloS one, vol. 8 (2), 2013.

A.  Kreshuk, ?Automated Analysis of Biomedical Data from Low to High Resolution?. University of Heidelberg, 2012.

A.  Kreshuk, Straehle, C. N., Sommer, C., Köthe, U., Cantoni, M., Knott, G. W., and Hamprecht, F. A., ?Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images?, PLoS ONE, vol. 6 (10), 2011.

A.  Kreshuk, Straehle, C. N., Sommer, C., Köthe, U., Knott, G. W., and Hamprecht, F. A., ?Automated Segmentation of Synapses in 3D EM Data?, in Eighth IEEE International Symposium on Biomedical Imaging (ISBI 2011).Proceedings, 2011, pp. 220-223.

A.  Kreshuk, Stankiewicz, M., Lou, X., Kirchner, M., Hamprecht, F. A., and Mayer, M. P., ?Automated detection and analysis of bimodal isotope peak distribution in H/D exchange mass spectrometry using HeXicon?, International Journal of Mass Spectrometry, vol. 302, pp. 125-131, 2010.