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Journal Article

C. Rother and Carlsson, S., “Linear multi view reconstruction and camera recovery using a reference plane”, International Journal of Computer Vision, vol. 49, pp. 117–141, 2002.

W. Peckar, Schnörr, C., Rohr, K., Stiehl, H. –S., and Spetzger, U., “Linear and Incremental Estimation of Elastic Deformations in Medical Registration Using Prescribed Displacements”, Machine Graphics & Vision, vol. 7, pp. 807–829, 1998.

T. Münsterer and Jähne, B., “LIF measurements of concentration profiles in the aqueous mass boundary layer”, Exp. Fluids, vol. 25, p. 190--196, 1998.

C. Sommer, Fiaschi, L., Hamprecht, F. A., and Gerlich, D., “Learning-based Mitotic Cell Detection in Histopathological Images”, ICPR 2012. Proceedings, pp. 2306-2309, 2012.

Technical Report (1.96 MB)

X. Lou and Hamprecht, F. A., “Learning to Segment Dense Cell Nuclei with Shape Prior”, CVPR 2012. Proceedings, pp. 1012-1018, 2012.

Technical Report (2.66 MB)

L. Fiaschi, Nair, R., Köthe, U., and Hamprecht, F. A., “Learning to Count with Regression Forest and Structured Labels”, ICPR 2012. Proceedings, pp. 2685-2688, 2012.

Technical Report (3.66 MB)

B. Ommer and Buhmann, J. M., “Learning the Compositional Nature of Visual Object Categories for Recognition”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, p. 501--516, 2010.

Technical Report (2.78 MB)

M. Heiler and Schnörr, C., “Learning Sparse Representations by Non-Negative Matrix Factorization and Sequential Cone Programming”, J. Mach. Learning Res., vol. 7, pp. 1385–1407, 2006.

H. Nickisch, Rother, C., Kohli, P., and Rhemann, C., “Learning an Interactive Segmentation System - Supplemental Material”, 2010.

R. Hühnerbein, Savarino, F., Petra, S., and Schnörr, C., “Learning Adaptive Regularization for Image Labeling Using Geometric Assignment”, preprint: arXiv, 2019.

B. Andres, Kappes, J. H., Köthe, U., and Hamprecht, F. A., “The Lazy Flipper: MAP Inference in Higher-Order Graphical Models by Depth-limited Exhaustive Search”, ArXiv e-prints, 2010.

Technical Report (625.06 KB)

L. Fiaschi, Grosser, K. - H., Afonso, B., Zlatic, M., and Hamprecht, F. A., “Keeping Count: Leveraging Temporal Context to Count Heavily Overlapping Objects”, ISBI 2013.Proceedings, pp. 656-659, 2013.

Technical Report (711.68 KB)

M. Storath, Weinmann, A., and Unser, M., “Jump-penalized least absolute values estimation of scalar or circle-valued signals”, Information and Inference, vol. 6, no. 3, pp. 225–245, 2017.

Technical Report (3.4 MB)

F. Diego, Serrat, J., and López, A. M., “Joint SpatioTemporal Alignment of Sequences”, IEEE Transactions on Multimedia (TMM), vol. PP (99), p. 1, 2012.

Technical Report (5.15 MB)

A. Stefanoiu, Weinmann, A., Storath, M., Navab, N., and Baust, M., “Joint Segmentation and Shape Regularization with a Generalized Forward Backward Algorithm”, IEEE Transactions on Image Processing, vol. 25, no. 7, pp. 3384 - 3394, 2016.

Technical Report (3.55 MB)

W. S. Broecker, Ledwell, J. R., Takahashi, T., Weiss, R., Merlivat, L., Memery, L., Jähne, B., and Münnich, K. O., “Isotopic versus micrometeorologic ocean CO$_2$ fluxes: A serious conflict”, J. Geophys. Res., vol. 91, p. 10517--10528, 1986.

U. Schimpf, Garbe, C. S., and Jähne, B., “Investigation of transport processes across the sea surface microlayer by infrared imagery”, J. Geophys. Res., vol. 109, p. C08S13, 2004.

B. Jähne, Libner, P., Fischer, R., Billen, T., and Plate, E. J., “Investigating the transfer process across the free aqueous boundary layer by the controlled flux method”, Tellus, vol. 41B, p. 177--195, 1989.

S. I. Friman and Jähne, B., “Investigating SO2 transfer across the air–water interface via LIF”, Exp. Fluids, vol. 60, p. 65, 2019.

J. Kunz and Jähne, B., “Investigating small scale air-sea exchange processes via thermography”, Front. Mech. Eng., vol. 26, 2018.

M. Wenig, Spichtinger, N., Stohl, A., Held, G., Beirle, S., Wagner, T., Jähne, B., and Platt, U., “Intercontinental transport of nitrogen oxide pollution plumes”, Atmos. Chem. Phys., vol. 3, p. 387--393, 2003.

M. Wenig, Spichtinger, N., Stohl, A., Held, G., Beirle, S., Wagner, T., Jähne, B., and Platt, U., “Intercontinental transport of nitrogen oxide pollution plumes”, acpd, vol. 3, p. 2151--2165, 2002.

L. Ding and Yilmaz, A., “Interactive image segmentation using probabilistic hypergraphs”, Pattern Recognition, vol. 43, pp. 1863–1873, 2010.

C. Rother and Kolmogorov, V., “Interactive foreground extraction using graph cut”, Advances in Markov \ldots, pp. 1–20, 2011.

J. Gall, Potthoff, J., Schnörr, C., Rosenhahn, B., and Seidel, H. - P., “Interacting and Annealing Particle Filters: Mathematics and a Recipe for Applications”, J. Math. Imag. Vision, vol. 28, pp. 1–18, 2007.

J. Gall, Potthoff, J., Schnörr, C., Rosenhahn, B., and Seidel, H. - P., “Interacting and Annealing Particle Filters: Mathematics and a Recipe for Applications”, J.~Math.~Imag.~Vision, vol. 28, p. 1--18, 2007.

Technical Report (1.11 MB)

L. M. Schütz, Louveaux, M., Vilches-Barro, A., Bouziri, S., Cerrone, L., Wolny, A., Kreshuk, A., Hamprecht, F. A., and Maizel, A., “Integration of Cell Growth and Asymmetric Division during Lateral Root Initiation in Arabidopsis thaliana”, Plant and Cell Physiology, vol. 62, no. 8, pp. 1269-1279, 2021.

S. Wolf, Hamprecht, F. A., and Funke, J., “Instance Separation Emerges from Inpainting”, arXiv preprint arXiv:2003.00891, 2020.

H. Suhr, Wehnert, G., Schneider, K., Bittner, C., Scholz, T., Geißler, P., Jähne, B., and Scheper, T., “In-situ microscopy for on-line characterization of cell-populations in bioreactors, including concentration measurements by depth from focus”, Biotechnology and Bioengineering, vol. 47, p. 106--116, 1995.

D. Kiefhaber, Zappa, C. J., and Jähne, B., “Influence of natural surfactants on short wind waves in the coastal Peruvian waters”, vol. 12, pp. 1291–1325, 2015.

A. Sanakoyeu, Ma, P., Tschernezki, V., and Ommer, B., “Improving Deep Metric Learning by Divide and Conquer”, IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI), 2021.

A. Biller, Badde, S., Nagel, A., Neumann, J. O., Wick, W., Hertenstein, A., Bendszus, M., Sahm, F., Benkhedah, N., and Kleesiek, J., “Improved Brain Tumor Classification by Sodium MR Imaging: Prediction of IDH Mutation Status and Tumor Progression”, American Journal of Neuroradiology, vol. 37 , pp. 66-73, 2016.

Y. Censor, Gibali, A., Lenzen, F., and Schnörr, C., “The Implicit Convex Feasibility Problem and Its Application to Adaptive Image Denoising”, J. Comp. Math., vol. 34, pp. 608-623, 2016.

E. Meijering, Carpenter, A. E., Peng, H., Hamprecht, F. A., and Olivo-Marin, J., “Imagining the future of bioimage analysis”, Nature Biotechnology, vol. 34, no. 12, pp. 1250-1255, 2016.

Technical Report (924.57 KB)

B. Jähne, Klinke, J., and Waas, S., “Imaging of short ocean wind waves: a critical theoretical review”, J. Opt. Soc. Am. A, vol. 11, p. 2197--2209, 1994.

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