Publications

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Author Title Type [ Year(Asc)]
2015
Antic, B, Büchler, U, Wahl, A - S, Schwab, M E and Ommer, B (2015). Spatiotemporal Parsing of Motor Kinematics for Assessing Stroke Recovery. Medical Image Computing and Computer-Assisted Intervention. SpringerPDF icon Article (2.24 MB)
Antic, B and Ommer, B (2015). Spatio-temporal Video Parsing for Abnormality Detection. arXiv. abs/1502.06235. http://arxiv.org/abs/1502.06235PDF icon Technical Report (4.61 MB)
Kondermann, D, Nair, R, Meister, S, Mischler, W, Güssefeld, B, Honauer, K, Hofmann, S, Brenner, C and Jähne, B (2015). Stereo Ground Truth with Error Bars. Computer Vision – ACCV 2014: 12th Asian Conference on Computer Vision, Singapore, Singapore, November 1-5, 2014, Revised Selected Papers, Part V. Springer International Publishing, Cham. 595–610. http://dx.doi.org/10.1007/978-3-319-16814-2_39
Cali, C, Baghabra, J, Boges, D J, Holst, G R, Kreshuk, A, Hamprecht, F A, Srinivasan, M, Lehväslaiho, H and Magistretti, P J (2015). Three-dimensional immersive virtual reality for studying cellular compartments in 3D models from EM preparations of neural tissues. Journal of Comparative Neurology. 524 23-38
Kappes, J H, Petra, S, Schnörr, C and Zisler, M (2015). TomoGC: Binary Tomography by Constrained Graph Cuts. Proc.~GCPRPDF icon Technical Report (2.46 MB)
Kappes, J H, Petra, S, Schnörr, C and Zisler, M (2015). TomoGC: Binary Tomography by Constrained Graph Cuts. Proc. GCPR
Kauppi, J P, Kandemir, M, Saarinen, V M, Hirvenkari, L, Parkkonen, L, Klami, A, Hari, R and Kaski, S (2015). Towards brain-activity-controlled information retrieval: Decoding image relevance from MEG signals. NeuroImage. 112 288-298PDF icon Technical Report (2.39 MB)
Trofimova, D (2015). Towards Four Dimensional Visualization of Air-Water Gas Exchange. Institut für Umweltphysik, Fakultät für Physik und Astronomie, Univ. Heidelberg. Dissertation
Bell, P and Ommer, B (2015). Training Argus. Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege. Zentralinstitut für Kunstgeschichte. 68 414--420
Richmond, D, Kainmueller, D, Glocker, B, Rother, C and Myers, G (2015). Uncertainty-driven forest predictors for vertebra localization and segmentation. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9349 653–660
Arnold, N (2015). Visualisierung Des Gasaustauschs An Der Windbewegten Wasseroberfläche Mittels Vertikaler Konzentrationsfelder Von Gelöstem Sauerstoff Quer Zur Windrichtung. Institut für Umweltphysik, Universität Heidelberg, Germany
Kräuter, (2015). Visualization of air-water gas exchange. Institut für Umweltphysik, Fakultät für Physik und Astronomie, Univ.\ Heidelberg. Dissertation
Kiefhaber, D, Caulliez, G, Zappa, C J, Schaper, J and Jähne, B (2015). Water wave measurement from stereo images of specular reflections. 26 115401
Kreshuk, A, Funke, J, Cardona, A and Hamprecht, F A (2015). Who is talking to whom: synaptic partner detection in anisotropic volumes of insect brain. MICCAI. Proceedings. Springer. LNCS 9349 661-668PDF icon Technical Report (2.14 MB)
2014
Kainmueller, D, Jug, F, Rother, C and Myers, G (2014). Active graph matching for automatic joint segmentation and annotation of C. elegans. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8673 LNCS 81–88
Lou, X, Schiegg, M and Hamprecht, F A (2014). Active Structured Learning for Cell Tracking: Algorithm, Framework and Usability. IEEE Transactions on Medical Imaging. 33 (4) 849-860PDF icon Technical Report (6.84 MB)
Nagel, L (2014). Active Thermography to Investigate Small-Scale Air-Water Transport Processes in the Laboratory and the Field. Institut für Umweltphysik, Fakultät für Chemie und Geowissenschaften, Univ.\ Heidelberg. Dissertation. http://www.ub.uni-heidelberg.de/archiv/16831
Krall, K Ellen and Jähne, B (2014). Air-sea gas exchange and momentum transfer: turbulence and Schmidt number dependency. 7th SOPRAN Annual Meeting, Bremen, Germany, 25-26 March 2014
Krall, K Ellen, Schneider-Zapf, K, Reith, S, Kiefhaber, D and Jähne, B (2014). Air-sea gas exchange under nature-like surfactant influence in the lab. 7th SOPRAN Annual Meeting, Bremen, Germany, 25-26 March 2014
Takami, M, Bell, P and Ommer, B (2014). An Approach to Large Scale Interactive Retrieval of Cultural Heritage. Eurographics Workshop on Graphics and Cultural Heritage. The Eurographics AssociationPDF icon Technical Report (7.94 MB)
Güssefeld, B, Kondermann, D, Schwartz, C and Klein, R (2014). Are reflectance field renderings appropriate for optical flow evaluation?. International Conference on Image Processing, ICIP 2014
Horn, M (2014). Arriving at Z / f. 1–2
Kröger, T, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2014). Asymmetric Cuts: Joint Image Labeling and Partitioning. 36th German Conference on Pattern Recognition
Kröger, T, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2014). Asymmetric Cuts: Joint Image Labeling and Partitioning. Pattern Recognition - 36th German Conference, {GCPR} 2014, Münster, Germany, September 2-5, 2014, Proceedings. http://dx.doi.org/10.1007/978-3-319-11752-2_16PDF icon Technical Report (3.46 MB)
Wahl, A - S, Omlor, W, Rubio, J C, Chen, J L, Zheng, H, Schröter, A, Gullo, M, Weinmann, O, Kobayashi, K, Helmchen, F, Ommer, B and Schwab, M E (2014). Asynchronous Therapy Restores Motor Control by Rewiring of the Rat Corticospinal Tract after Stroke. Science. American Association for The Advancement of Science. 344 1250--1255. http://www.sciencemag.org/content/344/6189/1250
Decker, C (2014). Automated Animal Behavior Classification. University of Heidelberg
Tek, B F, Kröger, T, Mikula, S and Hamprecht, F A (2014). Automated Cell Nucleus Detection for Large-Volume Electron Microscopy of Neural Tissue. ISBI. Proceedings. 69-72PDF icon Technical Report (533.92 KB)
Kreshuk, A, Köthe, U, Pax, E, Bock, D D and Hamprecht, F A (2014). Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks. PLoS ONE. 9 2PDF icon Technical Report (16.66 MB)
Petra, S and Schnörr, C (2014). Average Case Recovery Analysis of Tomographic Compressive Sensing. Linear Algebra and its Applications. 441 168-198PDF icon Technical Report (1.85 MB)
Maier-Hein, L, Mersmann, S, Kondermann, D, Bodenstedt, S, Sanchez, A, Stock, C, Kenngott, H, Eisenmann, M and Speidel, S (2014). Can masses of non-experts train highly accurate image classifiers? A crowdsourcing approach to instrument segmentation in laparoscopic images. MICCAI
Welbl, J (2014). Casting Random Forests as Artificial Neural Networks (and Profiting from It). GCPR. Proceedings. 765-771PDF icon Technical Report (376.24 KB)
Zhang, C, Yarkony, J and Hamprecht, F A (2014). Cell detection and segmentation using correlation clustering. MICCAI. Proceedings. Springer. 9-16PDF icon Technical Report (8.06 MB)
Nagel, L, Krall, K Ellen and Jähne, B (2014). Comparative heat and gas exchange measurements in the Heidelberg Aeolotron, a large annular wind-wave tank. Ocean Sci. Discuss. 11 1691--1718
Kappes, J H, Andres, B, Hamprecht, F A, Schnörr, C, Nowozin, S, Batra, D, Kim, S, Kausler, B X, Kröger, T, Lellmann, J, Komodakis, N, Savchynskyy, B and Rother, C (2014). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. CoRR. http://arxiv.org/abs/1404.0533
Kappes, J H, Andres, B, Hamprecht, F A, Schnörr, C, Nowozin, S, Batra, D, Kim, S, Kausler, B X, Kröger, T, Lellmann, J, Komodakis, N, Savchynskyy, B and Rother, C (2014). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. CoRR. abs/1404.0533. http://hci.iwr.uni-heidelberg.de/opengm2/PDF icon Technical Report (3.32 MB)

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