Publications

Export 1496 results:
Author Title Type [ Year(Asc)]
2017
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
Krasowki, N, Beier, T, Knott, G, Köthe, U, Hamprecht, F A and Kreshuk, A (2017). Neuron Segmentation with High-Level Biological Priors. IEEE Transactions on Medical Imaging. 37
Ulman, V, Maška, M, Magnusson, K E G, Ronneberger, O, Haubold, C, Harder, N, Matula, P, Matula, P, Svoboda, D, Radojevic, M, Smal, I, Rohr, K, Jaldén, J, Blau, H M, Dzyubachyk, O, Lelieveldt, B, Xiao, P, Li, Y, Cho, S - Y, Dufour, A, Olivo-Marin, J C, Reyes-Aldasoro, C C, Solis-Lemus, J A, Bensch, R, Brox, T, Stegmaier, J, Mikut, R, Wolf, S, Hamprecht, F A, Esteves, T, Quelhas, P, Demirel, Ö, Malström, L, Jug, F, Tomančák, P, Meijering, E, Muñoz-Barrutia, A, Kozubek, M and Ortiz-de-Solorzano, C (2017). An Objective Comparison of Cell Tracking Algorithms. Nature Methods. 14 1141-1152PDF icon Technical Report (4.24 MB)
Wahl, A S, Büchler, U, Brändli, A, Brattoli, B, Musall, S, Kasper, H, Ineichen, B V, Helmchen, F, Ommer, B and Schwab, M E (2017). Optogenetically stimulating the intact corticospinal tract post-stroke restores motor control through regionalized functional circuit formation. Nature Communications. (ASW & UB contributed equally; BO and MES contributed equally). https://www.nature.com/articles/s41467-017-01090-6
Hehn, T (2017). A Probabilistic Approach To Learn Complex Differentiable Split Functions In Decision Trees Using Gradient Ascent. Heidelberg University
Haubold, C (2017). Scalable Inference for Multi-Target Tracking on Proliferating Cells. University of Heidelberg
Neigel, P (2017). Self-Similarity Based Detection Of Temporal Motifs In Multivariate Signals. Heidelberg University
Sümer, Ö, Dencker, T and Ommer, B (2017). Self-supervised Learning of Pose Embeddings from Spatiotemporal Relations in Videos. Proceedings of the IEEE International Conference on Computer Vision (ICCV)PDF icon Paper (3.98 MB)PDF icon Supplementary Material (3.36 MB)
Pape, C, Beier, T, Li, P, Jain, V, Brock, D D and Kreshuk, A (2017). Solving Large Multicut Problems for Connectomics via Domain Decomposition. Bioimage Computing Workshop. ICCV. 1-10
Peter, S, Kirschbaum, E, Both, M, Campbell, L A, Harvey, B K, Heins, C, Durstewitz, D, Diego, F and Hamprecht, F A (2017). Sparse convolutional coding for neuronal assembly detection. NIPS, poster
Milbich, T, Bautista, M, Sutter, E and Ommer, B (2017). Unsupervised Video Understanding by Reconciliation of Posture Similarities. Proceedings of the IEEE International Conference on Computer Vision (ICCV). https://hciweb.iwr.uni-heidelberg.de/compvis/research/tmilbich_iccv17
Haußmann, M, Hamprecht, F A and Kandemir, M (2017). Variational Bayesian Multiple Instance Learning with Gaussian Processes. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR). 6570-6579PDF icon Technical Report (1.29 MB)
2016
Vianello, A, Manfredi, G, Diebold, M and Jähne, B (2016). 3D Reconstruction by a Combined Structure Tensor and Hough Transform Light-Field Approach. Forum Bildverarbeitung. https://doi.org/10.5445/KSP/1000059899
Krasowski, N (2016). Automated Segmentation for Connectomics Utilizing Higher-Order Biological Priors. University of Heidelberg
Pape, C (2016). Automatic Segmentation Of Neurites From Anisotropic Em-Imaging. University of Heidelberg
Prange, T (2016). Automatic Segmentation Of Neurons In Electron Microscopy Data With Membrane Defects. University of Heidelberg
Wolf, S (2016). Cell Tracking With Graphical Model Using Higher Order Features On Track Segments. University of Heidelberg
Bautista, M, Sanakoyeu, A, Sutter, E and Ommer, B (2016). CliqueCNN: Deep Unsupervised Exemplar Learning. Proceedings of the Conference on Advances in Neural Information Processing Systems (NIPS). MIT Press, Barcelona. https://arxiv.org/abs/1608.08792PDF icon Article (5.79 MB)
Baust, M, Weinmann, A, Wieczorek, M, Lasser, T, Storath, M and Navab, N (2016). Combined Tensor Fitting and TV Regularization in Diffusion Tensor Imaging based on a Riemannian Manifold Approach. IEEE Transactions on Medical Imaging. 35 1972–1989PDF icon Technical Report (8.65 MB)
Güssefeld, B, Honauer, K and Kondermann, D (2016). Creating Feasible Reflectance Data for Synthetic Optical Flow Datasets. Advances in Visual Computing - 12th International Symposium, {ISVC} 2016, Las Vegas, NV, USA, December 12-14, 2016, Proceedings, Part {I}. http://dx.doi.org/10.1007/978-3-319-50835-1_8
Honauer, K, Johannsen, O, Kondermann, D and Goldlücke, B (2016). A Dataset and Evaluation Methodology for Depth Estimation on 4D Light Fields. Computer Vision - ACCV 2016 : 13th Asian Conference on Computer Vision, Taipei, Taiwan, November 20-24, 2016, Revised Selected Papers, Part III. Springer, Cham
Schmidt, P (2016). Deep Learning For Bioimage Analysis. University of Heidelberg
Balles, L (2016). Deep Learning For Diabetic Retinopathy Diagnostics. University of Heidelberg
Kleesiek, J, Urban, G, Hubert, A, Schwarz, D, Maier-Hein, K, Bendszus, M and Biller, A (2016). Deep MRI brain extraction: A 3D convolutional neural network for skull stripping.. NeuroImage. 129 460-469PDF icon Technical Report (1.14 MB)
Bell, P and Ommer, B (2016). Digital Connoisseur? How Computer Vision Supports Art History. Connoisseurship nel XXI secolo. Approcci, Limiti, Prospettive, A. Aggujaro & S. Albl (ed.). Artemide, Rome
Swoboda, P, Kuske, J and Savchynskyy, B (2016). A Dual Ascent Framework for Lagrangean Decomposition of Combinatorial Problems. arXiv, preprint. https://arxiv.org/pdf/1612.05460.pdf
Beier, T, Andres, B, Köthe, U and Hamprecht, F A (2016). An Efficient Fusion Move Algorithm for the Minimum Cost Lifted Multicut Problem. ECCV. Proceedings. Springer. LNCS 9906 715-730PDF icon Technical Report (4.89 MB)
Schilling, H, Diebold, M, Gutsche, M, Aziz-Ahmad, H and Jähne, B (2016). A fractal calibration pattern for improved camera calibration. Forum Bildverarbeitung. https://doi.org/10.5445/KSP/1000059899
von Borstel, M, Kandemir, M, Schmidt, P, Rao, M, Rajamani, K and Hamprecht, F A (2016). Gaussian process density counting from weak supervision. ECCV. Proceedings. Springer. LNCS 9905 365-380 PDF icon Technical Report (1.71 MB)
Haubold, C, Ales, J, Wolf, S and Hamprecht, F A (2016). A Generalized Successive Shortest Paths Solver for Tracking Dividing Targets. ECCV. Proceedings. Springer. LNCS 9911 566-582PDF icon Technical Report (1.18 MB)
Kondermann, D, Nair, R, Honauer, K, Krispin, K, Andrulis, J, Brock, A, Güssefeld, B, Rahimimoghaddam, M, Hofmann, S, Brenner, C and Jähne, B (2016). The HCI Benchmark Suite: Stereo and Flow Ground Truth With Uncertainties for Urban Autonomous Driving. The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops
Diebold, M, Gatto, A and Jähne, B (2016). Heterogeneous Light Fields. 2016 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2016, Las Vegas, NV, USA, June 27-30, 2016. http://dx.doi.org/10.1109/CVPR.2016.193
Meijering, E, Carpenter, A E, Peng, H, Hamprecht, F A and Olivo-Marin, J (2016). Imagining the future of bioimage analysis. Nature Biotechnology. 34 1250-1255PDF icon Technical Report (924.57 KB)
Biller, A, Badde, S, Nagel, A, Neumann, J O, Wick, W, Hertenstein, A, Bendszus, M, Sahm, F, Benkhedah, N and Kleesiek, J (2016). Improved Brain Tumor Classification by Sodium MR Imaging: Prediction of IDH Mutation Status and Tumor Progression. American Journal of Neuroradiology. 37 66-73
Berger, J and Schnörr, C (2016). Joint Recursive Monocular Filtering of Camera Motion and Disparity Map. 38th German Conference on Pattern Recognition. Springer, Hannover. https://arxiv.org/abs/1606.02092PDF icon Technical Report (2.34 MB)

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