Publications
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] Year Filters: Author is Fred A. Hamprecht [Clear All Filters]
(2017). Learned Watershed: End-to-End Learning of Seeded Segmentation. ICCV. 2030-2038
Technical Report (3.76 MB)
Technical Report (3.76 MB) (2012). 3D Segmentation of SBFSEM Images of Neuropil by a Graphical Model over Supervoxel Boundaries. Medical Image Analysis. 16 (2012) 796-805 Technical Report (20.85 MB)
Technical Report (20.85 MB) (2012). Active Learning for Convenient Annotation and Classification of Secondary Ion Mass Spectrometry Images. Analytical Chemistry. 85 (1) 147-155 Technical Report (2.58 MB)
Technical Report (2.58 MB) (2012). Active Learning with Distributional Estimates. UAI 2012. Proceedings. 715-725 Technical Report (267.67 KB)
Technical Report (267.67 KB) (2017). Active machine learning for training an event classification. Patent, Patent Number WO2017032775 A1
(2014). Active Structured Learning for Cell Tracking: Algorithm, Framework and Usability. IEEE Transactions on Medical Imaging. 33 (4) 849-860 Technical Report (6.84 MB)
Technical Report (6.84 MB) (2007). amsrpm: Robust Point Matching in Retention Time Alignment of LC/MS Data with R. Journal of Statistical Software. 18 1-12. http://www.jstatsoft.org/v18/i04/paper
(2009). Analysing spatio-temporal patterns of the global NO2-distribution retrieved frome GOME satellite observations using a generalized additive model. Atmospheric Chemistry and Physics. 9 9367-9398 Technical Report (2.52 MB)
Technical Report (2.52 MB) (2009). Analysis of Single-Molecule Fluorescence Spectroscopic Data with a Markov Modulated Poisson Process. ChemPhysChem. 10:14 2486-2495
(2010). Automated detection and analysis of bimodal isotope peak distribution in H/D exchange mass spectrometry using HeXicon. International Journal of Mass Spectrometry. 302 125-131 Technical Report (3.22 MB)
Technical Report (3.22 MB) (2011). Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images. PLoS ONE. 6 (10) Technical Report (290.48 KB)
Technical Report (290.48 KB) (2014). Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks. PLoS ONE. 9 2 Technical Report (16.66 MB)
Technical Report (16.66 MB) (2007). Automated Estimation of Tumor Probability in Prostate MRSI: Pattern Recognition vs. Quantification. Magnetic Resonance in Medicine. 57 150-159 Technical Report (348.05 KB)
Technical Report (348.05 KB) (2013). Automated Identification of Neuronal Activity from Calcium Imaging by Sparse Dictionary Learning. ISBI 2013. Proceedings. 1058-1061 Technical Report (2.82 MB)
Technical Report (2.82 MB) (2013). Automated Processing of Zebrafish Imaging Data: A Survey. Zebrafish. 10 (3) Technical Report (1.73 MB)
Technical Report (1.73 MB) (2015). Automated Tracing of Myelinated Axons and Detection of the Nodes of Ranvier in Serial Images of Peripheral Nerves. Journal of Microscopy. 259 (2) 143-154
(2012). Automated vs. manual pattern recognition of 3D 1H MRSI data of patients with prostate cancer. Academic Radiology. 19, 6 675-684
(2005). Bayesian surface estimation for white light interferometry. Optical Engineering. 44 1-9 Technical Report (549.46 KB)
Technical Report (549.46 KB) (2002). Chemical library subset selection algorithms: a unified derivation using spatial statistics. Journal of Chemical Information and Computer Sciences. 42 414-428
(2014). A Comparative Study of Modern Inference Techniques for Structured
Discrete Energy Minimization Problems. CoRR. http://arxiv.org/abs/1404.0533
(2014). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. CoRR. abs/1404.0533. http://hci.iwr.uni-heidelberg.de/opengm2/ Technical Report (3.32 MB)
Technical Report (3.32 MB) (2015). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. International Journal of Computer Vision. 1-30 Technical Report (1.5 MB)
Technical Report (1.5 MB) (2015). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. Int.~J.~Comp.~Vision Technical Report (5.12 MB)
Technical Report (5.12 MB) (2007). Comparison of correctness of manuel and automatic evaluation of MR-spectrum with prostrate cancer. Der Urologe. 46 1252
(2009). A Comparison of Random Forest and its Gini Importance with Standard Chemometric Methods for the Feature Selection and Classification of Spectral Data. BMC Bioinformatics. 10:213 Technical Report (675 KB)
Technical Report (675 KB) (2010). Computational Protein Profile Similarity Screening for Quantitative Mass Spectrometry Experiments. Bioinformatics. 26 (1) 77-83 Technical Report (380.19 KB)
Technical Report (380.19 KB) (2014). Computer-aided diagnosis from weak supervision: A benchmarking study. Computerized Medical Imaging and Graphics. 42 44-50 Technical Report (4.28 MB)
Technical Report (4.28 MB) (2008). Concise Representation of MS Images by Probabilistic Latent Semantic Analysis. Analytical Chemistry. 80 9649-9658 Technical Report (3.91 MB)
Technical Report (3.91 MB) (2013). Correlative in vivo 2 photon and focused ion beam scanning electron microscopy of cortical neurons. PloS one. 8 (2) Technical Report (2.13 MB)
Technical Report (2.13 MB) (2009). Denoising of Continuous-Wave Time-Of-Flight Depth Images Using Confidence Measures. Optical Engineering. 48, 077003 Technical Report (2.5 MB)
Technical Report (2.5 MB) (2010). Deuteration Distribution Estimation with Improved Sequence Coverage for HX/MS Experiments. Bioinformatics. 26(12) 1535-1541 Technical Report (518.01 KB)
Technical Report (518.01 KB) (1998). Development and assessment of new exchange-correlation functionals. Journal of Chemical Physics. 109 6264-6271
(2008). Different Phosphorylation States of the Anaphase Promoting Complex in Response to Anti-Mitotic Drugs: A Quantitative Proteomic Analysis. Proceedings of the National Academy of Sciences. 105 6069-6074 Technical Report (173.02 KB)
Technical Report (173.02 KB) (2017). Diverse Shortest Paths for Bioimage Analysis. Bioinformatics. 1-3