Publications

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Author Title [ Type(Desc)] Year
Journal Article
Staudacher, M, Hamprecht, F A and Görlitz, L (2008). Method for processing an intensity image of a microscope. Patent, Patent Number: WO2008034721A1PDF icon Technical Report (39.81 KB)
Kirchner, M, Steen, J A J, Hamprecht, F A and Steen, H (2010). MGFp: An Open Mascot Generic Format Parser Library Implementation. Journal of Proteome Research. 9 (5) 27622763PDF icon Technical Report (125.18 KB)
Zappa, C J, Asher, W E, Jessup, A T, Klinke, J and Long, S R (2004). Microbreaking and the enhancement of air-water transfer velocity. J. Geophys. Res. 109 C08S16
Roetmann, K, Schmunk, W, Garbe, C S and Beushausen, V (2008). Micro-flow analysis by molecular tagging velocimetry and planar raman-scattering. Exp. Fluids. 44 419--430
Pape, C, Remme, R, Wolny, A, Olberg, S, Wolf, S, Cerrone, L, Cortese, M, Klaus, S, Lucic, B, Ullrich, S, Anders-Össwein, M, Wolf, S, Cerikan, B, Neufeldt, C J, Ganter, M, Schnitzler, P, Merle, U, Lusic, M, Boulant, S, Stanifer, M, Bartenschlager, R, Hamprecht, F A, Kreshuk, A, Tischer, C, Kräusslich, H - G, Müller, B and Laketa, V (2020). Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera. BioEssays, in press
Menze, B H, Kelm, B Michael, Weber, M - A, Bachert, P and Hamprecht, F A (2008). Mimicking the human expert: pattern recognition for an automated assessment of data quality in MRSI. Magnetic Resonance in Medicine. 59 1457-1466PDF icon Technical Report (1.45 MB)
Schäfer, H, Lenzen, F and Garbe, C S (2014). Model based scattering correction in time-of-flight cameras. Optics Express. 22 29835-29846
Kiechle, M, Storath, M, Weinmann, A and Kleinsteuber, M (2018). Model-based learning of local image features for unsupervised texture segmentation. IEEE Transactions on Image Processing. 27 1994-2007
Breitenreicher, D and Schnörr, C (2011). Model-Based Multiple Rigid Object Detection and Registration in Unstructured Range Data. Int. J. Comp. Vision. 92 32–52. http://www.springerlink.com/content/v266873267180602/
Breitenreicher, D and Schnörr, C (2011). Model-Based Multiple Rigid Object Detection and Registration in Unstructured Range Data. Int.~J.~Comp.~Vision. 92 32--52. http://www.springerlink.com/content/v266873267180602/PDF icon Technical Report (4.3 MB)
Schmitzer, B and Schnörr, C (2013). Modelling convex shape priors and matching based on the Gromov-Wasserstein distance. Journal of Mathematical Imaging and Vision. 46 143-159PDF icon Technical Report (957.78 KB)
Schmitzer, B and Schnörr, C (2013). Modelling convex shape priors and matching based on the Gromov-Wasserstein distance. Journal of Mathematical Imaging and Vision. 46 143-159
Gee, P J, Hamprecht, F A, Schuler, L D, van Gunsteren, W F, Duchardt, E, Schwalbe, H, Albert, M and Seebach, D (2002). A molecular dynamics simulation study of the conformational preferences of oligo-(3- hydroxyalcanoic acids) in chloroform solution. Helv. Chim. Acta. 85 618-632
Wagner, T, Leue, C, Pfeilsticker, K and Platt, U (2001). Monitoring of the stratospheric chlorine activation by Global Ozone Monitoring Experiment (GOME) OClO measurements in the austral and boreal winters 1995 through 1999. J. Geophys. Res. 106 4971-4986
Enzweiler, M and Gavrila, D M (2008). Monocular Pedestrian Detection: Survey and Experiments. IEEE Transactions on Pattern Analysis and Machine Intelligence, available online: IEEE Computer Society Digital Library, http://doi.ieeecomputersociety.org/10.1109/TPAMI.2008.260
Monroy, A, Bell, P and Ommer, B (2014). Morphological Analysis for Investigating Artistic Images. Image and Vision Computing. Elsevier. 32 414--423PDF icon Technical Report (2.86 MB)
Uttenweiler, D, Veigel, C, Steubing, R, Götz, C, Mann, S, Haußecker, H, Jähne, B and Fink, R H A (2000). Motion determination in actin filament fluorescence images with a spatio-temporal orientation analysis method.. Biophys J. Institut für Physiologie und Pathophysiologie, Ruprecht-Karls-Universität Heidelberg, 69120 Heidelberg, Germany. uttenweiler@urz.uni-heidelberg.de. 78 2709--2715
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
Kappes, J Hendrik, Swoboda, P, Savchynskyy, B, Hazan, T and Schnörr, C (2016). Multicuts and Perturb & MAP for Probabilistic Graph Clustering. Journal of Mathematical Imaging and Vision. 56 221–237. http://arxiv.org/abs/1601.02088
Kappes, J H, Swoboda, P, Savchynskyy, B, Hazan, T and Schnörr, C (2016). Multicuts and Perturb & MAP for Probabilistic Graph Clustering. J. Math. Imag. Vision. 56 221–237
Jähne, B, Brocke, M, Eisele, H, Hader, S, Hamprecht, F A, Happold, W, Raisch, F and Restle, J (2002). Multidimensionale Bildverarbeitung in der Produktion. QZ. 47 1154--1159. http://www.qz-online.de/qz-zeitschrift/archiv/artikel/multidimensionale-bildverarbeitung-in-der-produktion-fuer-anspruchsvolle-338129.html
Bruhn, A, Weickert, J, Kohlberger, T and Schnörr, C (2006). A Multigrid Platform for Real-Time Motion Computation with Discontinuity-Preserving Variational Methods. Int.~J.~Computer Vision. 70 257-277PDF icon Technical Report (447.65 KB)
Bruhn, A, Weickert, J, Kohlberger, T and Schnörr, C (2006). A Multigrid Platform for Real-Time Motion Computation with Discontinuity-Preserving Variational Methods. Int. J. Computer Vision. 70 257-277
Menze, B H and Hamprecht, F A (2010). Multimodal Medical Image Analysis: from Visualization to Disease Modeling. Zeitschrift für Med. Physik. 1 1-2PDF icon Technical Report (481.58 KB)
Cremers, D, Sochen, N and Schnörr, C (2006). Multiphase Dynamic Labeling for Variational Recognition-Driven Image Segmentation. ijcv. 66 67-81
Kandemir, M, Klami, A, Gonen, M, Vetek, A and Kaski, S (2014). Multi-task and multi-view learning of user state. Neurocomputing. 139 97-106
Menze, B H, Petrich, W and Hamprecht, F A (2007). Multivariate feature selection and hierarchical classification for infrared spectroscopy: serum-based detection of bovine spongiform encephalopathy. Analytical and Bioanalytical Chemistry. 387 1801-1807PDF icon Technical Report (283.47 KB)
Wolf, S, Bailoni, A, Pape, C, Rahaman, N, Kreshuk, A, Köthe, U and Hamprecht, F A (2020). The Mutex Watershed and its Objective: Efficient, Parameter-Free Graph Partitioning. IEEE Transactions on Pattern Analysis and Machine IntelligencePDF icon Technical Report (2.58 MB)
Heiler, M and Schnörr, C (2005). Natural Image Statistics for Natural Image Segmentation. Int. J. Comp. Vision. 63 5–19
Goldlücke, B, Strekalovskiy, E and Cremers, D (2012). The Natural Vectorial Total Variation which Arises from Geometric Measure Theory. SIAM Journal on Imaging Sciences. 5 537-563
Goldlücke, B, Strekalovskiy, E and Cremers, D (2012). The natural vectorial total variation which arises from geometric measure theory. SIAM Journal on Imaging Sciences
Trittler, S and Hamprecht, F A (2009). Near-Optimum Sampling Design and an Efficient Algorithm for Single Tone Frequency Estimation. Digital Signal Processing. 19 628-639PDF icon Technical Report (511.23 KB)
Krasowki, N, Beier, T, Knott, G W, Köthe, U, Hamprecht, F A and Kreshuk, A (2017). Neuron Segmentation with High-Level Biological Priors. IEEE Transactions on Medical Imaging. 37
Renard, B Y, Kirchner, M, Steen, H, Steen, J A J and Hamprecht, F A (2008). NITPICK: Peak Identification for Mass Spectrometry Data. BMC Bioinformatics. 9 355PDF icon Technical Report (643.89 KB)
Jähne, B and Schwarzbauer, M (2016). Noise equalisation and quasi loss-less image data compression – or how many bits needs an image sensor?. tm – Technisches Messen. 83 16–24

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