Publications
] (2012). The Lazy Flipper: Efficient Depth-limited Exhaustive Search in Discrete Graphical Models. ECCV 2012
Technical Report (532.64 KB)
Technical Report (532.64 KB) (2012). The Lazy Flipper: Efficient Depth-Limited Exhaustive Search in Discrete Graphical Models. Computer Vision - {ECCV} 2012 - 12th European Conference on Computer Vision, Florence, Italy, October 7-13, 2012, Proceedings, Part {VII}. http://dx.doi.org/10.1007/978-3-642-33786-4_12 Technical Report (446.28 KB)
Technical Report (446.28 KB) (2012). Learning to Count with Regression Forest and Structured Labels. ICPR 2012. Proceedings. 2685-2688 Technical Report (3.66 MB)
Technical Report (3.66 MB) (2012). Quality Classification of Microscopic Imagery with Weakly Supervised Learning. MICCAI-MLMI. Proceedings. 176-183 Technical Report (4.15 MB)
Technical Report (4.15 MB) (2012). Seeded watershed cut uncertainty estimators for guided interactive segmentation. CVPR 2012. Proceedings. 765 - 772 Technical Report (2.84 MB)
Technical Report (2.84 MB) (2013). K-smallest Spanning Tree Segmentations. German Conference on Pattern Recognition (DAGM/GCPR). Proceedings. Springer. 375-384 Technical Report (1.18 MB)
Technical Report (1.18 MB) (2013). Learning to Segment Neurons with Non-local Quality Measures. MICCAI 2013. Proceedings, part II. Springer. 8150 419-427 Technical Report (2.87 MB)
Technical Report (2.87 MB) (2013). Weakly supervised learning of image partitioning using decision trees with structured split criteria. ICCV 2013. Proceedings. 1849-1856 Technical Report (5.97 MB)
Technical Report (5.97 MB) (2014). Asymmetric Cuts: Joint Image Labeling and Partitioning. Pattern Recognition - 36th German Conference, {GCPR} 2014, Münster, Germany, September 2-5, 2014, Proceedings. http://dx.doi.org/10.1007/978-3-319-11752-2_16 Technical Report (3.46 MB)
Technical Report (3.46 MB) (2014). Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks. PLoS ONE. 9 2 Technical Report (16.66 MB)
Technical Report (16.66 MB) (2014). Cut, Glue and Cut: A Fast, Approximate Solver for Multicut Partitioning. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014. http://dx.doi.org/10.1109/CVPR.2014.17 Technical Report (10.06 MB)
Technical Report (10.06 MB) (2014). ilastik for Multi-modal Brain Tumor Segmentation. MICCAI BraTS (Brain Tumor Segmentation) Challenge. Proceedings, 3rdplace. 12-17 Technical Report (405.91 KB)
Technical Report (405.91 KB) (2014). Multiple instance learning with response-optimized random forests. ICPR. Proceedings. 3768 - 3773 Technical Report (296.66 KB)
Technical Report (296.66 KB) (2014). SimpleSTORM: a fast, self-calibrating reconstruction algorithm for localization microscopy. Histochemistry and Cell Biology. 141 613-627 Technical Report (2.29 MB)
Technical Report (2.29 MB) (2014). Tracking indistinguishable translucent objects over time using weakly supervised structured learning. CVPR. Proceedings. 2736 - 2743 Technical Report (1.47 MB)
Technical Report (1.47 MB) (2015). Automated Tracing of Myelinated Axons and Detection of the Nodes of Ranvier in Serial Images of Peripheral Nerves. Journal of Microscopy. 259 (2) 143-154
(2015). Graphical Model for Joint Segmentation and Tracking of Multiple Dividing Cell. Bioinformatics. 31 948-956. http://bioinformatics.oxfordjournals.org/content/early/2014/11/17/bioinformatics.btu764.full.pdf?keytype=ref&ijkey=mTXWsiFrci7R8tc Technical Report (534.29 KB)
Technical Report (534.29 KB) (2015). Improving 3D EM Data Segmentation by Joint Optimization over Boundary Evidence and Biological Priors. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015. 536-539 Technical Report (2.25 MB)
Technical Report (2.25 MB) (2015). Proof-reading Guidance in Cell Tracking by Sampling from Tracking-by-assignment Models. ISBI. Proceedings. 394-398 Technical Report (648.55 KB)
Technical Report (648.55 KB) (2016). An Efficient Fusion Move Algorithm for the Minimum Cost Lifted Multicut Problem. ECCV. Proceedings. Springer. LNCS 9906 715-730 Technical Report (4.89 MB)
Technical Report (4.89 MB) (2016). Segmenting and Tracking Multiple Dividing Targets Using ilastik. Focus on Bio-Image Informatics. Springer. 219 199-229 Technical Report (4.46 MB)
Technical Report (4.46 MB) (2016). Virtual Raters for Reproducible and Objective Assessments in Radiology. Nature Scientific Reports. 6 Technical Report (2.81 MB)
Technical Report (2.81 MB)