Publications
2017
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017).
Multicut brings automated neurite segmentation closer to human performance.
Nature Methods.
14 101-102.
http://rdcu.be/oVDQ 2019
Berg, S, Kutra, D, Kroeger, T, Straehle, C N, Kausler, B X, Haubold, C, Schiegg, M, Ales, J, Beier, T, Rudy, M, Eren, K, Cervantes, J I, Xu, B, Beuttenmüller, F, Wolny, A, Zhang, C, Köthe, U, Hamprecht, F A and Kreshuk, A (2019).
ilastik: interactive machine learning for (bio)image analysis.
Nature Methods.
16 1226-1232
2020
Wolny, A, Cerrone, L, Vijayan, A, Tofanelli, R, A Barro, V, Louveaux, M, Wenzl, C, Steigleder, S, Pape, C, Bailoni, A, Duran-Nebreda, S, Bassel, G W, Lohmann, J U, Hamprecht, F A, Schneitz, K, Maizel, A and Kreshuk, A (2020).
Accurate and versatile 3D segmentation of plant tissues at cellular resolution.
eLife, in press Pape, C, Remme, R, Wolny, A, Olberg, S, Wolf, S, Cerrone, L, Cortese, M, Klaus, S, Lucic, B, Ullrich, S, Anders-Össwein, M, Wolf, S, Cerikan, B, Neufeldt, C J, Ganter, M, Schnitzler, P, Merle, U, Lusic, M, Boulant, S, Stanifer, M, Bartenschlager, R, Hamprecht, F A, Kreshuk, A, Tischer, C, Kräusslich, H - G, Müller, B and Laketa, V (2020).
Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera.
BioEssays, in press Wolf, S, Li, Y, Pape, C, Bailoni, A, Kreshuk, A and Hamprecht, F A (2020).
The Semantic Mutex Watershed for Efficient Bottom-Up Semantic Instance Segmentation.
ECCV. Proceedings. 208-224
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