Publications
Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images. PLoS ONE. 6 (10)
Technical Report (290.48 KB)
(2011). 
Automated Segmentation of Synapses in 3D EM Data. Eighth IEEE International Symposium on Biomedical Imaging (ISBI 2011).
Proceedings. 220-223
(2011). Carving: Scalable Interactive Segmentation of Neural Volume Electron Microscopy Images. MICCAI 2011, Proceedings. Springer. 6891 653-660
Technical Report (1.69 MB)
(2011). (2013). 
Globally Optimal Closed-Surface Segmentation for Connectomics. ECCV 2012. Proceedings, Part 3. 778-791
Technical Report (2.72 MB)
(2012). 
Improving 3D EM Data Segmentation by Joint Optimization over Boundary Evidence and Biological Priors. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015. 536-539
Technical Report (2.25 MB)
(2015). 
Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
(2017). (2017).
Semiautomated Correlative 3D Electron Microscopy of In Vivo Imaged Axons and Dendrites. Nature Protocols. 9 1354-1366
Technical Report (2.01 MB)
(2014). 