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Journal Article

Milbich, T, Ghori, O and Ommer, B (2020). Unsupervised Representation Learning by Discovering Reliable Image Relations. Pattern Recognition. 102. http://arxiv.org/abs/1911.07808

Brattoli, B, Büchler, U, Dorkenwald, M, Reiser, P, Filli, L, Helmchen, F, Wahl, A - S and Ommer, B (2021). Unsupervised behaviour analysis and magnification (uBAM) using deep learning. Nature Machine Intelligence. https://rdcu.be/ch6pL

Lang, S and Ommer, B (2021). Transforming Information Into Knowledge: How Computational Methods Reshape Art History. Digital Humanities Quaterly (DHQ). 15

Lang, S and Ommer, B (2021). Transforming Information Into Knowledge: How Computational Methods Reshape Art History. Digital Humanities Quaterly (DHQ). 15. http://digitalhumanities.org/dhq/vol/15/3/000560/000560.html

Bell, P and Ommer, B (2015). Training Argus. Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege. Zentralinstitut für Kunstgeschichte. 68 414--420

Antic, B and Ommer, B (2015). Spatio-temporal Video Parsing for Abnormality Detection. arXiv. abs/1502.06235. http://arxiv.org/abs/1502.06235

Technical Report (4.61 MB)

Milbich, T, Roth, K, Brattoli, B and Ommer, B (2020). Sharing Matters for Generalization in Deep Metric Learning. IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI). https://arxiv.org/abs/2004.05582

Ommer, B, Mader, T and Buhmann, J M (2009). Seeing the Objects Behind the Dots: Recognition in Videos from a Moving Camera. International Journal of Computer Vision. Springer. 83 57--71

Technical Report (9.61 MB)

Lang, S and Ommer, B (2018). Reconstructing Histories: Analyzing Exhibition Photographs with Computational Methods. Arts, Computational Aesthetics. 7, 64

arts-07-00064.pdf (4.6 MB)

Wahl, A - S, Büchler, U, Brändli, A, Brattoli, B, Musall, S, Kasper, H, Ineichen, B V, Helmchen, F, Ommer, B and Schwab, M E (2017). Optogenetically stimulating the intact corticospinal tract post-stroke restores motor control through regionalized functional circuit formation. Nature Communications. (ASW & UB contributed equally; BO and MES contributed equally). https://www.nature.com/articles/s41467-017-01090-6

Ulman, V, Maška, M, Magnusson, K E G, Ronneberger, O, Haubold, C, Harder, N, Matula, P, Matula, P, Svoboda, D, Radojevic, M, Smal, I, Rohr, K, Jaldén, J, Blau, H M, Dzyubachyk, O, Lelieveldt, B, Xiao, P, Li, Y, Cho, S - Y, Dufour, A, Olivo-Marin, J C, Reyes-Aldasoro, C C, Solis-Lemus, J A, Bensch, R, Brox, T, Stegmaier, J, Mikut, R, Wolf, S, Hamprecht, F A, Esteves, T, Quelhas, P, Demirel, Ö, Malström, L, Jug, F, Tomančák, P, Meijering, E, Muñoz-Barrutia, A, Kozubek, M and Ortiz-de-Solorzano, C (2017). An Objective Comparison of Cell Tracking Algorithms. Nature Methods. 14 1141-1152

Technical Report (4.24 MB)

Bell, P, Schlecht, J and Ommer, B (2013). Nonverbal Communication in Medieval Illustrations Revisited by Computer Vision and Art History. Visual Resources Journal, Special Issue on Digital Art History. Taylor & Francis. 29 26--37. http://www.tandfonline.com/doi/abs/10.1080/01973762.2013.761111

Monroy, A, Bell, P and Ommer, B (2014). Morphological Analysis for Investigating Artistic Images. Image and Vision Computing. Elsevier. 32 414--423

Technical Report (2.86 MB)

Pape, C, Remme, R, Wolny, A, Olberg, S, Wolf, S, Cerrone, L, Cortese, M, Klaus, S, Lucic, B, Ullrich, S, Anders-Össwein, M, Wolf, S, Cerikan, B, Neufeldt, C J, Ganter, M, Schnitzler, P, Merle, U, Lusic, M, Boulant, S, Stanifer, M, Bartenschlager, R, Hamprecht, F A, Kreshuk, A, Tischer, C, Kräusslich, H - G, Müller, B and Laketa, V (2021). Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera. BioEssays. 43

Ommer, B and Buhmann, J M (2010). Learning the Compositional Nature of Visual Object Categories for Recognition. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. 32 501--516

Technical Report (2.78 MB)

Sanakoyeu, A, Ma, P, Tschernezki, V and Ommer, B (2021). Improving Deep Metric Learning by Divide and Conquer. IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI). https://arxiv.org/abs/2109.04003

Meijering, E, Carpenter, A E, Peng, H, Hamprecht, F A and Olivo-Marin, J (2016). Imagining the future of bioimage analysis. Nature Biotechnology. 34 1250-1255

Technical Report (924.57 KB)

Rubio, J C, Eigenstetter, A and Ommer, B (2015). Generative Regularization with Latent Topics for Discriminative Object Recognition. Pattern Recognition. Elsevier. 48 3871--3880

Technical Report (5.49 MB)

Wahl, A - S, Erlebach, E, Brattoli, B, Büchler, U, Kaiser, J, Ineichen, V B, Mosberger, A C, Schneeberger, S, Imobersteg, S, Wieckhorst, M, Stirn, M, Schroeter, A, Ommer, B and Schwab, M E (2018). Early reduced behavioral activity induced by large strokes affects the efficiency of enriched environment in rats. Sage Journals. Journal of Cerebral Blood Flow & Metabolism. http://journals.sagepub.com/doi/abs/10.1177/0271678X18777661

0271678x18777661.pdf (770.87 KB)

Sanakoyeu, A, Bautista, M and Ommer, B (2018). Deep Unsupervised Learning of Visual Similarities. Pattern Recognition. 78. https://authors.elsevier.com/a/1WXUt77nKSb25

PDF (8.35 MB)

Dencker, T, Klinkisch, P, Maul, S M and Ommer, B (2020). Deep learning of cuneiform sign detection with weak supervision using transliteration alignment. PLoS ONE. 15. https://hci.iwr.uni-heidelberg.de/compvis/projects/cuneiform

Ozlu, N, Monigatti, F, Renard, B Y, Field, C M, Steen, H, Mitchison, T J and Steen, J J (2009). Binding partner switching on microtubules and aurora-B in the mitosis to cytokinesis transition. Molecular & Cellular Proteomics

Yarlagadda, P and Ommer, B (2015). Beyond the Sum of Parts: Voting with Groups of Dependent Entities. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. 37 1134--1147. https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6926849

Lang, S and Ommer, B (2018). Attesting Similarity: Supporting the Organization and Study of Art Image Collections with Computer Vision. Digital Scholarship in the Humanities, Oxford University Press. 33 845-856

Wahl, A - S, Omlor, W, Rubio, J C, Chen, J L, Zheng, H, Schröter, A, Gullo, M, Weinmann, O, Kobayashi, K, Helmchen, F, Ommer, B and Schwab, M E (2014). Asynchronous Therapy Restores Motor Control by Rewiring of the Rat Corticospinal Tract after Stroke. Science. American Association for The Advancement of Science. 344 1250--1255. http://www.sciencemag.org/content/344/6189/1250

inproceedings

Milbich, T, Roth, K, Sinha, S, Schmidt, L, Ghassemi, M and Ommer, B (2021). Characterizing Generalization under Out-Of-Distribution Shifts in Deep Metric Learning. https://arxiv.org/abs/2107.09562

In Collection

Acker, J F, Berkels, B, Bredies, K, Diallo, M S, Droske, M, Garbe, C S, Holschneider, M, Hron, J, Kondermann, C, Kulesh, M, Maass, P, Olischläger, N and Peitgen, H - O (2008). Inverse Problems and Parameter Identification in Image Processing. Mathematical Methods in Time Series Analysis and Digital Image Processing. Springer. 111--151

Conference Proceedings

Kotovenko, D, Sanakoyeu, A, Lang, S, Ma, P and Ommer, B (2019). Using a Transformation Content Block For Image Style Transfer. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR)

Braun, S, Esser, P and Ommer, B (2020). Unsupervised Part Discovery by Unsupervised Disentanglement. Proceedings of the German Conference on Pattern Recognition (GCPR) (Oral). Tübingen. https://compvis.github.io/unsupervised-part-segmentation/

Dorkenwald, M, Büchler, U and Ommer, B (2020). Unsupervised Magnification of Posture Deviations Across Subjects. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR)

article.pdf (1.15 MB)

Blattmann, A, Milbich, T, Dorkenwald, M and Ommer, B (2021). Understanding Object Dynamics for Interactive Image-to-Video Synthesis. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR). https://arxiv.org/abs/2106.11303v1

Esser, P, Rombach, R and Ommer, B (2021). Taming Transformers for High-Resolution Image Synthesis. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR). https://arxiv.org/abs/2012.09841

Dorkenwald, M, Milbich, T, Blattmann, A, Rombach, R, Derpanis, K G and Ommer, B (2021). Stochastic Image-to-Video Synthesis usin cINNs. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR)

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