Publications

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2017
Peter, S, Diego, F, Hamprecht, F A and Nadler, B (2017). Cost-efficient Gradient Boosting. NIPS, poster
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ
Pape, C, Beier, T, Li, P, Jain, V, Brock, D D and Kreshuk, A (2017). Solving Large Multicut Problems for Connectomics via Domain Decomposition. Bioimage Computing Workshop. ICCV. 1-10
Peter, S, Kirschbaum, E, Both, M, Campbell, L A, Harvey, B K, Heins, C, Durstewitz, D, Diego, F and Hamprecht, F A (2017). Sparse convolutional coding for neuronal assembly detection. NIPS, poster
2015
Bodnariuc, E, Gurung, A, Petra, S and Schnörr, C (2015). Adaptive Dictionary-Based Spatio-temporal Flow Estimation for Echo PIV. Proc.~EMMCVPR. Springer. 8932 378--391PDF icon Technical Report (951.37 KB)
Bodnariuc, E, Gurung, A, Petra, S and Schnörr, C (2015). Adaptive Dictionary-Based Spatio-temporal Flow Estimation for Echo PIV. EMMCVPR
Krah, N, Testa, M, Brons, S, Jäkel, O, Parodi, K, Voss, B and Rinaldi, I (2015). An advanced image processing method to improve the spatial resolution of ion radiographies. Physics in Medicine and Biology. 60 8525. http://stacks.iop.org/0031-9155/60/i=21/a=8525
Kreshuk, A, Walecki, R, Köthe, U, Gierthmühlen, M, Plachta, D, Genoud, C, Haastert-Talini, K and Hamprecht, F A (2015). Automated Tracing of Myelinated Axons and Detection of the Nodes of Ranvier in Serial Images of Peripheral Nerves. Journal of Microscopy. 259 (2) 143-154
Peter, S (2015). Spatio-Temporal Motif Deconvolution For Calcium Image Analysis. University of Heidelberg
Kappes, J H, Petra, S, Schnörr, C and Zisler, M (2015). TomoGC: Binary Tomography by Constrained Graph Cuts. Proc.~GCPRPDF icon Technical Report (2.46 MB)
Kauppi, J P, Kandemir, M, Saarinen, V M, Hirvenkari, L, Parkkonen, L, Klami, A, Hari, R and Kaski, S (2015). Towards brain-activity-controlled information retrieval: Decoding image relevance from MEG signals. NeuroImage. 112 288-298PDF icon Technical Report (2.39 MB)
2013
Mikut, R, Dickmeis, T, Driever, W, Geurts, P, Hamprecht, F A, Kausler, B X, Ledesma-Carbayo, M, Marée, R, Mikula, K, Pantazis, P, Ronneberger, O, Santos, A and Stotzka, R (2013). Automated Processing of Zebrafish Imaging Data: A Survey. Zebrafish. 10 (3)PDF icon Technical Report (1.73 MB)
Petra, S, Schnörr, C, Becker, F and Lenzen, F (2013). B-SMART: Bregman-Based First-Order Algorithms for Non-Negative Compressed Sensing Problems. Proceedings of the 4th International Conference on Scale Space and Variational Methods in Computer Vision SSVM. 110-124
Petra, S, Schnörr, C, Becker, F and Lenzen, F (2013). B-SMART: Bregman-Based First-Order Algorithms for Non-Negative Compressed Sensing Problems. Proceedings of the 4th International Conference on Scale Space and Variational Methods in Computer Vision (SSVM) 2013. Springer. 7893 110-124PDF icon Technical Report (1.15 MB)
Lenzen, F, Becker, F, Lellmann, J, Petra, S and Schnörr, C (2013). A Class of Quasi-Variational Inequalities for Adaptive Image Denoising and Decomposition. Computational Optimization and Applications (COAP). 54 (2) 371-398
Lenzen, F, Becker, F, Lellmann, J, Petra, S and Schnörr, C (2013). A class of quasi-variational inequalities for adaptive image denoising and decomposition. Computational Optimization and Applications. Springer Netherlands. 54 371-398. http://dx.doi.org/10.1007/s10589-012-9456-0PDF icon Technical Report (748.66 KB)

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