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Conference Paper

Kröger, T, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2014). Asymmetric Cuts: Joint Image Labeling and Partitioning. Pattern Recognition - 36th German Conference, {GCPR} 2014, Münster, Germany, September 2-5, 2014, Proceedings. http://dx.doi.org/10.1007/978-3-319-11752-2_16

Technical Report (3.46 MB)

Kröger, T, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2014). Asymmetric Cuts: Joint Image Labeling and Partitioning. 36th German Conference on Pattern Recognition

Beier, T, Kröger, T, Kappes, J H, Köthe, U and Hamprecht, F A (2014). Cut, Glue and Cut: A Fast, Approximate Solver for Multicut Partitioning. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014. http://dx.doi.org/10.1109/CVPR.2014.17

Technical Report (10.06 MB)

Beier, T, Hamprecht, F A and Kappes, J H (2015). Fusion Moves for Correlation Clustering. CVPR. Proceedings. 3507-3516

Technical Report (1.19 MB)

Krasowski, N, Beier, T, Knott, G W, Köthe, U, Hamprecht, F A and Kreshuk, A (2015). Improving 3D EM Data Segmentation by Joint Optimization over Boundary Evidence and Biological Priors. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015. 536-539

Technical Report (2.25 MB)

Andres, B, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2012). The Lazy Flipper: Efficient Depth-Limited Exhaustive Search in Discrete Graphical Models. Computer Vision - {ECCV} 2012 - 12th European Conference on Computer Vision, Florence, Italy, October 7-13, 2012, Proceedings, Part {VII}. http://dx.doi.org/10.1007/978-3-642-33786-4_12

Technical Report (446.28 KB)

Andres, B, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2012). The Lazy Flipper: Efficient Depth-limited Exhaustive Search in Discrete Graphical Models. ECCV 2012

Technical Report (532.64 KB)

Andres, B, Kappes, J Hendrik, Beier, T, Köthe, U and Hamprecht, F A (2012). The Lazy Flipper: Efficient Depth-limited Exhaustive Search in Discrete Graphical Models. ECCV 2012

Kappes, J H, Beier, T and Schnörr, C (2014). MAP-Inference on Large Scale Higher-Order Discrete Graphical Models by Fusion Moves. Computer Vision - {ECCV} 2014 Workshops - Zurich, Switzerland, September 6-7 and 12, 2014, Proceedings, Part {II}. http://dx.doi.org/10.1007/978-3-319-16181-5_37

Technical Report (557.49 KB)

Kappes, J Hendrik, Beier, T and Schnörr, C (2014). MAP-Inference on Large Scale Higher-Order Discrete Graphical Models by Fusion Moves. International Workshop on Graphical Models in Computer Vision

Yarkony, J, Beier, T, Baldi, P and Hamprecht, F A (2014). Parallel Multicut Segmentation via Dual Decomposition. New Frontiers in Mining Complex Patterns - Third International Workshop, {NFMCP} 2014, Held in Conjunction with {ECML-PKDD} 2014, Nancy, France, September 19, 2014, Revised Selected Papers. http://dx.doi.org/10.1007/978-3-319-17876-9_4

Andres, B, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2011). Probabilistic Image Segmentation with Closedness Constraints. Proceedings of ICCV

Technical Report (2.95 MB)

Andres, B, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2011). Probabilistic Image Segmentation with Closedness Constraints. Proceedings of ICCV

Andres, B, Kappes, J H, Beier, T, Köthe, U and Hamprecht, F A (2011). Probabilistic Image Segmentation with Closedness Constraints. ICCV, Proceedings. 2611 - 2618

Technical Report (8.18 MB)

Conference Proceedings

Beier, T, Andres, B, Köthe, U and Hamprecht, F A (2016). An Efficient Fusion Move Algorithm for the Minimum Cost Lifted Multicut Problem. ECCV. Proceedings. Springer. LNCS 9906 715-730

Technical Report (4.89 MB)

inproceedings

Pape, C, Beier, T, Li, P, Jain, V, Brock, D D and Kreshuk, A (2017). Solving Large Multicut Problems for Connectomics via Domain Decomposition. Bioimage Computing Workshop. ICCV. 1-10

Journal Article

Berg, S, Kutra, D, Kroeger, T, Straehle, C N, Kausler, B X, Haubold, C, Schiegg, M, Ales, J, Beier, T, Rudy, M, Eren, K, Cervantes, J I, Xu, B, Beuttenmüller, F, Wolny, A, Zhang, C, Köthe, U, Hamprecht, F A and Kreshuk, A (2019). ilastik: interactive machine learning for (bio)image analysis. Nature Methods. 16 1226-1232

Beier, T, Pape, C, Rahaman, N, Prange, T, Berg, S, Bock, D, Cardona, A, Knott, G W, Plaza, S M, Scheffer, L K, Köthe, U, Kreshuk, A and Hamprecht, F A (2017). Multicut brings automated neurite segmentation closer to human performance. Nature Methods. 14 101-102. http://rdcu.be/oVDQ

Krasowki, N, Beier, T, Knott, G W, Köthe, U, Hamprecht, F A and Kreshuk, A (2017). Neuron Segmentation with High-Level Biological Priors. IEEE Transactions on Medical Imaging. 37

Andres, B, Beier, T and Kappes, J H (2012). OpenGM: A C++ Library for Discrete Graphical Models. ArXiv e-prints

Masters Thesis

Beier, T (2014). Graph Based Image Analysis. University of Heidelberg

PhD Thesis

Beier, T (2018). Multicut Algorithms for Neurite Segmentation. Heidelberg University