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Kreshuk, A, Walecki, R, Köthe, U, Gierthmühlen, M, Plachta, D, Genoud, C, Haastert-Talini, K and Hamprecht, F A (2015). Automated Tracing of Myelinated Axons and Detection of the Nodes of Ranvier in Serial Images of Peripheral Nerves. Journal of Microscopy. 259 (2) 143-154

Hissmann, M and Hamprecht, F A (2005). Bayesian surface estimation for white light interferometry. Optical Engineering. 44 1-9

Technical Report (549.46 KB)

Yarlagadda, P and Ommer, B (2015). Beyond the Sum of Parts: Voting with Groups of Dependent Entities. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. 37 1134--1147. https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6926849

Hamprecht, F A, Thiel, W and van Gunsteren, W F (2002). Chemical library subset selection algorithms: a unified derivation using spatial statistics. Journal of Chemical Information and Computer Sciences. 42 414-428

Kappes, J H, Andres, B, Hamprecht, F A, Schnörr, C, Nowozin, S, Batra, D, Kim, S, Kausler, B X, Kröger, T, Lellmann, J, Komodakis, N, Savchynskyy, B and Rother, C (2015). A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. International Journal of Computer Vision. 1-30

Technical Report (1.5 MB)

Kirchner, M, Renard, B Y, Köthe, U, Pappin, D J, Hamprecht, F A, Steen, J A J and Steen, H (2010). Computational Protein Profile Similarity Screening for Quantitative Mass Spectrometry Experiments. Bioinformatics. 26 (1) 77-83

Technical Report (380.19 KB)

Kandemir, M and Hamprecht, F A (2014). Computer-aided diagnosis from weak supervision: A benchmarking study. Computerized Medical Imaging and Graphics. 42 44-50

Technical Report (4.28 MB)

Hanselmann, M, Kirchner, M, Renard, B Y, Amstalden, E R, Glunde, K, Heeren, R M A and Hamprecht, F A (2008). Concise Representation of MS Images by Probabilistic Latent Semantic Analysis. Analytical Chemistry. 80 9649-9658

Technical Report (3.91 MB)

Frank, M, Plaue, M and Hamprecht, F A (2009). Denoising of Continuous-Wave Time-Of-Flight Depth Images Using Confidence Measures. Optical Engineering. 48, 077003

Technical Report (2.5 MB)

Hamprecht, F A, Cohen, A J, Tozer, D J and Handy, N C (1998). Development and assessment of new exchange-correlation functionals. Journal of Chemical Physics. 109 6264-6271

Funke, J, Andres, B, Hamprecht, F A, Cardona, A and Cook, M (2012). Efficient Automatic 3D-Reconstruction of Branching Neurons from EM Data. CVPR 2012. Proceedings. 1004-1011

Technical Report (1.64 MB)

Lichy, M P, Bachert, P, Hamprecht, F A, Weber, M - A, Debus, J, Schulz-Ertner, D, Kauczor, H - U and Schlemmer, H - P (2006). Einsatz der 1H-MR-spektroskopischen Bildgebung in der Strahlentherapie: Cholin als Marker für die Bestimmung der relativen Wahrscheinlichkeit eines Tumorprogresses nach Bestrahlung glialer Hirntumoren. Zeitung für Röntgenforschung. 178 627-633

Andres, B, Kondermann, C, Kondermann, D, Köthe, U, Hamprecht, F A and Garbe, C S (2008). On errors-in-variables regression with arbitrary covariance and its application to optical flow estimation. Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on. 1-6

Technical Report (1.58 MB)

Kelm, B Michael, Menze, B H, Nix, O, Zechmann, C M and Hamprecht, F A (2009). Estimating Kinetic Parameter Maps from Dynamic Contrast-Enhanced MRI using Spatial Prior Knowledge. IEEE Transaction on Medical Imaging. 28:10 1534-1547

Technical Report (419.8 KB)

Hamprecht, F A, Achleitner, U, Krismer, A C, Lindner, K H, Wenzel, V, Strohmenger, H - U, Thiel, W and van Gunsteren, W F (2001). Fibrillation power: An alternative method of ECG spectral analysis for prediction of countershock success in a porcine model of ventricular fibrillation. Resuscitation. 50 287-296

Börner, K, Hermle, J, Sommer, C, Brown, N P, Knapp, B, Glass, B, Torralba, G, Reymann, J, Beil, N, Beneke, J, Pepperkok, R, Schneider, R and Ludwig, T (2010). From experimental setup to bioinformatics: An RNAi screening platform to identify host factors involved in HIV-1 replication. Biotechnology Journal. 5 39-49

Technical Report (556.09 KB)

Rubio, J C, Eigenstetter, A and Ommer, B (2015). Generative Regularization with Latent Topics for Discriminative Object Recognition. Pattern Recognition. Elsevier. 48 3871--3880

Technical Report (5.49 MB)

Andres, B, Köthe, U, Kröger, T and Hamprecht, F A (2010). How to Extract the Geometry and Topology from Very Large 3D Segmentations. ArXiv e-prints. http://arxiv.org/abs/1009.6215

Technical Report (1.44 MB)

Frank, M and Hamprecht, F A (2011). Image-Based Supervision of a Periodically Working Machine. Pattern Analysis and Applications. 1-10

Technical Report (466.61 KB)

Diego, F, Serrat, J and López, A M (2012). Joint SpatioTemporal Alignment of Sequences. IEEE Transactions on Multimedia (TMM). PP (99) 1

Technical Report (5.15 MB)

Fiaschi, L, Grosser, K - H, Afonso, B, Zlatic, M and Hamprecht, F A (2013). Keeping Count: Leveraging Temporal Context to Count Heavily Overlapping Objects. ISBI 2013.Proceedings. 656-659

Technical Report (711.68 KB)

Andres, B, Kappes, J H, Köthe, U and Hamprecht, F A (2010). The Lazy Flipper: MAP Inference in Higher-Order Graphical Models by Depth-limited Exhaustive Search. ArXiv e-prints. http://arxiv.org/abs/1009.4102

Technical Report (625.06 KB)

Ommer, B and Buhmann, J M (2010). Learning the Compositional Nature of Visual Object Categories for Recognition. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. 32 501--516

Technical Report (2.78 MB)

Fiaschi, L, Nair, R, Köthe, U and Hamprecht, F A (2012). Learning to Count with Regression Forest and Structured Labels. ICPR 2012. Proceedings. 2685-2688

Technical Report (3.66 MB)

Kirchner, M, Steen, J A J, Hamprecht, F A and Steen, H (2010). MGFp: An Open Mascot Generic Format Parser Library Implementation. Journal of Proteome Research. 9 (5) 27622763

Technical Report (125.18 KB)

Gee, P J, Hamprecht, F A, Schuler, L D, van Gunsteren, W F, Duchardt, E, Schwalbe, H, Albert, M and Seebach, D (2002). A molecular dynamics simulation study of the conformational preferences of oligo-(3- hydroxyalcanoic acids) in chloroform solution. Helv. Chim. Acta. 85 618-632

Monroy, A, Bell, P and Ommer, B (2014). Morphological Analysis for Investigating Artistic Images. Image and Vision Computing. Elsevier. 32 414--423

Technical Report (2.86 MB)

Kandemir, M, Klami, A, Gonen, M, Vetek, A and Kaski, S (2014). Multi-task and multi-view learning of user state. Neurocomputing. 139 97-106

Bell, P, Schlecht, J and Ommer, B (2013). Nonverbal Communication in Medieval Illustrations Revisited by Computer Vision and Art History. Visual Resources Journal, Special Issue on Digital Art History. Taylor & Francis. 29 26--37. http://www.tandfonline.com/doi/abs/10.1080/01973762.2013.761111

Kaster, F O, Merkel, B, Nix, O and Hamprecht, F A (2011). An object-oriented library for systematic training and comparison of classifiers for computer-assisted tumor diagnosis from MRSI measurements. Computer Science - Research and Development. 26 65-85

Technical Report (808.16 KB)

Horvát, E - A, Hanselmann, M, Hamprecht, F A and Zweig, K A (2012). One plus one makes three (for social networks). PLoS ONE. 4,7

Künsch, H R, Agrell, E and Hamprecht, F A (2005). Optimal lattices for sampling. IEEE Transactions on Information Theory. 51 634-647

Hamprecht, F A, Jost, D, Rüttimann, M, Calamai, F and Kowalski, J J (2001). Preliminary results on the prediction of countershock success with fibrillation power. Resuscitation. 50 297-299

Jäger, M and Hamprecht, F A (2008). Principal Component Imagery for the Quality Monitoring of Dynamic Laser Welding Processes. IEEE Transactions on Industrial Electronics. 56:4 1307-1313

Görlitz, L, Menze, B H, Kelm, B Michael and Hamprecht, F A (2009). Processing Spectral Data. Surface and Interface Analysis. 41 636-644

Technical Report (4.17 MB)

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