Publications

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Journal Article
Suhr, H, Wehnert, G, Schneider, K, Bittner, C, Scholz, T, Geißler, P, Jähne, B and Scheper, T (1995). In-situ microscopy for on-line characterization of cell-populations in bioreactors, including concentration measurements by depth from focus. Biotechnology and Bioengineering. 47 106--116
Gall, J, Potthoff, J, Schnörr, C, Rosenhahn, B and Seidel, H - P (2007). Interacting and Annealing Particle Filters: Mathematics and a Recipe for Applications. J.~Math.~Imag.~Vision. 28 1--18PDF icon Technical Report (1.11 MB)
Gall, J, Potthoff, J, Schnörr, C, Rosenhahn, B and Seidel, H - P (2007). Interacting and Annealing Particle Filters: Mathematics and a Recipe for Applications. J. Math. Imag. Vision. 28 1–18
Schimpf, U, Garbe, C S and Jähne, B (2004). Investigation of transport processes across the sea surface microlayer by infrared imagery. J. Geophys. Res. 109 C08S13
Fiaschi, L, Grosser, K - H, Afonso, B, Zlatic, M and Hamprecht, F A (2013). Keeping Count: Leveraging Temporal Context to Count Heavily Overlapping Objects. ISBI 2013.Proceedings. 656-659PDF icon Technical Report (711.68 KB)
Sommer, C, Fiaschi, L, Hamprecht, F A and Gerlich, D (2012). Learning-based Mitotic Cell Detection in Histopathological Images. ICPR 2012. Proceedings. 2306-2309PDF icon Technical Report (1.96 MB)
Bengio, Y, Deleu, T, Rahaman, N, Ke, R, Lachapelle, S, Bilaniuk, O, Goyal, A and Pal, C (2019). A Meta-Transfer Objective for Learning to Disentangle Causal Mechanisms. arXiv preprint arXiv:1901.10912PDF icon Technical Report (871.59 KB)
Staudacher, M, Hamprecht, F A and Görlitz, L (2008). Method for processing an intensity image of a microscope. Patent, Patent Number: WO2008034721A1PDF icon Technical Report (39.81 KB)
Roetmann, K, Schmunk, W, Garbe, C S and Beushausen, V (2008). Micro-flow analysis by molecular tagging velocimetry and planar raman-scattering. Exp. Fluids. 44 419--430
Pape, C, Remme, R, Wolny, A, Olberg, S, Wolf, S, Cerrone, L, Cortese, M, Klaus, S, Lucic, B, Ullrich, S, Anders-Össwein, M, Wolf, S, Cerikan, B, Neufeldt, C J, Ganter, M, Schnitzler, P, Merle, U, Lusic, M, Boulant, S, Stanifer, M, Bartenschlager, R, Hamprecht, F A, Kreshuk, A, Tischer, C, Kräusslich, H - G, Müller, B and Laketa, V (2021). Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera. BioEssays. 43
Schäfer, H, Lenzen, F and Garbe, C S (2014). Model based scattering correction in time-of-flight cameras. Optics Express. 22 29835-29846
Gee, P J, Hamprecht, F A, Schuler, L D, van Gunsteren, W F, Duchardt, E, Schwalbe, H, Albert, M and Seebach, D (2002). A molecular dynamics simulation study of the conformational preferences of oligo-(3- hydroxyalcanoic acids) in chloroform solution. Helv. Chim. Acta. 85 618-632
Enzweiler, M and Gavrila, D M (2008). Monocular Pedestrian Detection: Survey and Experiments. IEEE Transactions on Pattern Analysis and Machine Intelligence, available online: IEEE Computer Society Digital Library, http://doi.ieeecomputersociety.org/10.1109/TPAMI.2008.260
Uttenweiler, D, Veigel, C, Steubing, R, Götz, C, Mann, S, Haußecker, H, Jähne, B and Fink, R H A (2000). Motion determination in actin filament fluorescence images with a spatio-temporal orientation analysis method.. Biophys J. Institut für Physiologie und Pathophysiologie, Ruprecht-Karls-Universität Heidelberg, 69120 Heidelberg, Germany. uttenweiler@urz.uni-heidelberg.de. 78 2709--2715
Kandemir, M, Klami, A, Gonen, M, Vetek, A and Kaski, S (2014). Multi-task and multi-view learning of user state. Neurocomputing. 139 97-106
Goldlücke, B, Strekalovskiy, E and Cremers, D (2012). The Natural Vectorial Total Variation which Arises from Geometric Measure Theory. SIAM Journal on Imaging Sciences. 5 537-563
Goldlücke, B, Strekalovskiy, E and Cremers, D (2012). The natural vectorial total variation which arises from geometric measure theory. SIAM Journal on Imaging Sciences
Garbe, C S, Roetmann, K, Beushausen, V and Jähne, B (2008). An optical flow MTV based technique for measuring microfluidic flow in the presence of diffusion and Taylor dispersion. Exp. Fluids. 44 439--450
Munder, S, Schnörr, C and Gavrila, D M (2008). Pedestrian Detection and Tracking Using a Mixture of View-Based Shape-Texture Models. IEEE Trans. Intell. Transp. Systems. 9 333-343
Preusser, T, Droske, M, Garbe, C S, Rumpf, M and Telea, A (2007). A phase field method for joint denoising, edge detection, and motion estimation in image sequence processing.. SIAM Journal of Applied Mathematics. 68 599-618
Geese, M, Ruhnau, P and Jähne, B (2013). PRNU and DSNU Maximum Likelihood Estimation Using Sensor Statistics. tm --- Technisches Messen. 80 321--328
Görlitz, L, Menze, B H, Kelm, B Michael and Hamprecht, F A (2009). Processing Spectral Data. Surface and Interface Analysis. 41 636-644PDF icon Technical Report (4.17 MB)
Bhowmik, A, Gumhold, S, Rother, C and Brachmann, E (2019). Reinforced Feature Points: Optimizing Feature Detection and Description for a High-Level Task. http://arxiv.org/abs/1912.00623
Wenig, M, Kuhl, S, Beirle, S, Bucsela, E, Jähne, B, Platt, U, Gleason, J and Wagner, T (2004). Retrieval and analysis of stratospheric NO$_2$ from the Global Ozone Monitoring Experiment. J. Geophys. Res. 109 D04315, 1--11
Álvarez, J M, Gevers, T, Diego, F and López, A M (2012). Road Geometry Classification by Adaptive Shape Models. IEEE Transactions on Intelligent Transportation Systems (ITS). 99 1-10
Staudacher, M, Hamprecht, F A and Görlitz, L (2009). Self Adjustment of Scanning Electron Microscopes / Selbstadaptivität von Rasterelektronenmikroskopen. Patent, Patent Number WO2009062781A1PDF icon Technical Report (46.64 KB)
Zhang, X and Garbe, C S (2004). Studying dynamical processes of air-sea exchanges with air-water interface image techniques. Recent Research Developments in Fluid Dynamics. 5 57--87. www-pord.ucsd.edu/~xzhang/publication/fd1.pdf
Goldlücke, B, Aubry, M, Kolev, K and Cremers, D (2014). A super-resolution framework for high-accuracy multiview reconstruction. Int. J. Comp. Vision. 106 172--191
Garbe, C S, Schimpf, U and Jähne, B (2004). A surface renewal model to analyze infrared image sequences of the ocean surface for the study of air-sea heat and gas exchange. J. Geophys. Res. 109 1-18
Berthe, A, Kondermann, D, Christensen, C, Goubergrits, L, Garbe, C S, Affeld, K and Kertzscher, U (2010). Three-dimensional, three-component wall-PIV. Exp. Fluids. 48 online
Berthe, A, Kondermann, D, Christensen, C, Goubergrits, L, Garbe, C S, Affeld, K and Kertzscher, U (2010). Three-dimensional, three-component wall-PIV. Exp. Fluids. 48 online
Goldlücke, B, Strekalovskiy, E and Cremers, D (2013). Tight convex relaxations for vector-valued labeling. SIAM Journal on Imaging Sciences
Esposito, M, Hennersperger, C, Göbl, R, Demaret, L, Storath, M, Navab, N, Baust, M and Weinmann, A (2019). Total variation regularization of pose signals with an application to 3D freehand ultrasound. IEEE Transactions on Medical Imaging. 38(10) 2245-2258
Hanselmann, M, Köthe, U, Kirchner, M, Renard, B Y, Amstalden, E R, Glunde, K, Heeren, R M A and Hamprecht, F A (2009). Towards Digital Staining using Imaging Mass Spectrometry and Random Forests. Journal of Proteome Research. 8 3558-3567PDF icon Technical Report (1.47 MB)
Milbich, T, Ghori, O and Ommer, B (2020). Unsupervised Representation Learning by Discovering Reliable Image Relations. Pattern Recognition. 102. http://arxiv.org/abs/1911.07808

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