Publications

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2009
Jäger, M, Kiel, A, Herten, D - P and Hamprecht, F A (2009). Analysis of Single-Molecule Fluorescence Spectroscopic Data with a Markov Modulated Poisson Process. ChemPhysChem. 10:14 2486-2495
Kaster, F O, Kelm, B Michael, Zechmann, C M, Weber, M - A, Hamprecht, F A and Nix, O (2009). Classification of Spectroscopic Images in the DIROlab Environment. World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany. Springer. 25/V 252--255PDF icon Technical Report (145.73 KB)
Menze, B H, Kelm, B Michael, Masuch, R, Himmelreich, U, Bachert, P, Petrich, W and Hamprecht, F A (2009). A Comparison of Random Forest and its Gini Importance with Standard Chemometric Methods for the Feature Selection and Classification of Spectral Data. BMC Bioinformatics. 10:213PDF icon Technical Report (675 KB)
Frank, M, Plaue, M and Hamprecht, F A (2009). Denoising of Continuous-Wave Time-Of-Flight Depth Images Using Confidence Measures. Optical Engineering. 48, 077003PDF icon Technical Report (2.5 MB)
Kelm, B Michael, Menze, B H, Nix, O, Zechmann, C M and Hamprecht, F A (2009). Estimating Kinetic Parameter Maps from Dynamic Contrast-Enhanced MRI using Spatial Prior Knowledge. IEEE Transaction on Medical Imaging. 28:10 1534-1547PDF icon Technical Report (419.8 KB)
Hanselmann, M, Köthe, U, Renard, B Y, Kirchner, M, Heeren, R M A and Hamprecht, F A (2009). Multivariate Watershed Segmentation of Compositional Data. Proceedings of the 15th International Conference on Discrete Geometry for Computer Imagery (DGCI), in press. Springer. 5810 180-192PDF icon Technical Report (1.25 MB)
Trittler, S and Hamprecht, F A (2009). Near-Optimum Sampling Design and an Efficient Algorithm for Single Tone Frequency Estimation. Digital Signal Processing. 19 628-639PDF icon Technical Report (511.23 KB)
Görlitz, L, Menze, B H, Kelm, B Michael and Hamprecht, F A (2009). Processing Spectral Data. Surface and Interface Analysis. 41 636-644PDF icon Technical Report (4.17 MB)
Andres, B, Köthe, U, Bonea, A, Nadler, B and Hamprecht, F A (2009). Quantitative Assessment of Image Segmentation Quality by Random Walk Relaxation Times. Pattern Recognition. 31st DAGM Symposium, Jena, Germany, September 9-11, 2009. Proceedings. Springer. 5748 502-511PDF icon Technical Report (3.08 MB)
Staudacher, M, Hamprecht, F A and Görlitz, L (2009). Self Adjustment of Scanning Electron Microscopes / Selbstadaptivität von Rasterelektronenmikroskopen. Patent, Patent Number WO2009062781A1PDF icon Technical Report (46.64 KB)
Frank, M, Plaue, M, Rapp, H, Köthe, U, Jähne, B and Hamprecht, F A (2009). Theoretical and experimental error analysis of continuous-wave time-of-flight range cameras. Opt. Eng. 48 013602
Frank, M, Plaue, M, Rapp, H, Köthe, U, Jähne, B and Hamprecht, F A (2009). Theoretical and Experimental Error Analysis of Continuous-Wave Time-Of-Flight Range Cameras. Optical Engineering. 48, 013602PDF icon Technical Report (2.03 MB)
Hanselmann, M, Köthe, U, Kirchner, M, Renard, B Y, Amstalden, E R, Glunde, K, Heeren, R M A and Hamprecht, F A (2009). Towards Digital Staining using Imaging Mass Spectrometry and Random Forests. Journal of Proteome Research. 8 3558-3567PDF icon Technical Report (1.47 MB)
Renard, B Y, Kirchner, M, Monigatti, F, Ivanov, A R, Rappsilber, J, Winter, D, Steen, J A J, Hamprecht, F A and Steen, H (2009). When Less Can Yield More - Computational Preprocessing of MS/MS Spectra for Peptide Identification Preprocessing. Proteomics. 9 4978-4984PDF icon Technical Report (901.78 KB)
2008
Hanselmann, M, Kirchner, M, Renard, B Y, Amstalden, E R, Glunde, K, Heeren, R M A and Hamprecht, F A (2008). Concise Representation of MS Images by Probabilistic Latent Semantic Analysis. Analytical Chemistry. 80 9649-9658PDF icon Technical Report (3.91 MB)
Steen, J A J, Steen, H, Georgi, A, Parker, K C, Springer, M, Kirchner, M, Hamprecht, F A and Kirschner, M W (2008). Different Phosphorylation States of the Anaphase Promoting Complex in Response to Anti-Mitotic Drugs: A Quantitative Proteomic Analysis. Proceedings of the National Academy of Sciences. 105 6069-6074PDF icon Technical Report (173.02 KB)
Andres, B, Kondermann, C, Kondermann, D, Hamprecht, F A and Garbe, C S (2008). On errors-in-variables regression with arbitrary covariance and its application to optical flow estimation. IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2008. IEEE. 1--6
Andres, B, Kondermann, C, Kondermann, D, Köthe, U, Hamprecht, F A and Garbe, C S (2008). On errors-in-variables regression with arbitrary covariance and its application to optical flow estimation. Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on. 1-6PDF icon Technical Report (1.58 MB)
Staudacher, M, Hamprecht, F A and Görlitz, L (2008). Method for processing an intensity image of a microscope. Patent, Patent Number: WO2008034721A1PDF icon Technical Report (39.81 KB)
Menze, B H, Kelm, B Michael, Weber, M - A, Bachert, P and Hamprecht, F A (2008). Mimicking the human expert: pattern recognition for an automated assessment of data quality in MRSI. Magnetic Resonance in Medicine. 59 1457-1466PDF icon Technical Report (1.45 MB)
Renard, B Y, Kirchner, M, Steen, H, Steen, J A J and Hamprecht, F A (2008). NITPICK: Peak Identification for Mass Spectrometry Data. BMC Bioinformatics. 9 355PDF icon Technical Report (643.89 KB)
Jäger, M and Hamprecht, F A (2008). Principal Component Imagery for the Quality Monitoring of Dynamic Laser Welding Processes. IEEE Transactions on Industrial Electronics. 56:4 1307-1313
König, T, Menze, B H, Kirchner, M, Monigatti, F, Parker, K C, Patterson, T, Steen, J J, Hamprecht, F A and Steen, H (2008). Robust Prediction of the MASCOT Score for an Improved Quality Assessment in Mass Spectrometric Proteomics. Journal of Proteome Research. 7 3708-3717PDF icon Technical Report (1.16 MB)
Andres, B, Köthe, U, Helmstaedter, M, Denk, W and Hamprecht, F A (2008). Segmentation of SBFSEM Volume Data of Neural Tissue by Hierarchical Classification. Pattern Recognition. 30th DAGM Symposium Munich, Germany, June 10-13, 2008. Proceedings. Springer. 5096 142-152PDF icon Technical Report (1.21 MB)
Jäger, M, Humbert, S and Hamprecht, F A (2008). Sputter Tracking for the Automatic Monitoring of Industrial Laser Welding Processes. IEEE Transactions on Industrial Electronics. 55 2177-2184PDF icon Technical Report (1.83 MB)
Rapp, H, Frank, M, Hamprecht, F A and Jähne, B (2008). A Theoretical and Experimental Investigation of the Systematic Errors and Statistical Uncertainties of Time-of-Flight Cameras. Int. J. Intelligent Systems Technologies and Applications. 5 402-413PDF icon Technical Report (798.23 KB)
Rapp, H, Frank, M, Hamprecht, F A and Jähne, B (2008). A theoretical and experimental investigation of the systematic errors and statistical uncertainties of time-of-flight cameras. Int. J. Intelligent Systems Technologies and Applications. 5 402--413
Jäger, M, Knoll, C and Hamprecht, F A (2008). Weakly Supervised Learning of a Classifier for Unusual Event Detection. IEEE Transactions on Image Processing. 17 1700-1708PDF icon Technical Report (295.32 KB)
2007
Kondermann, C, Kondermann, D, Jähne, B, Garbe, C S, Schnörr, C and Jähne, B (2007). An adaptive confidence measure for optical flows based on linear subspace projections. Proceedings of the 29th DAGM Symposium on Pattern Recognition. Springer. 4713 132--141
Kirchner, M, Saussen, B, Steen, H, Steen, J A J and Hamprecht, F A (2007). amsrpm: Robust Point Matching in Retention Time Alignment of LC/MS Data with R. Journal of Statistical Software. 18 1-12. http://www.jstatsoft.org/v18/i04/paper
Kelm, B Michael, Menze, B H, Zechmann, C M, Baudendistel, K T and Hamprecht, F A (2007). Automated Estimation of Tumor Probability in Prostate MRSI: Pattern Recognition vs. Quantification. Magnetic Resonance in Medicine. 57 150-159PDF icon Technical Report (348.05 KB)
Weber, C, Zechmann, C M, Kelm, B Michael, Zamecnik, R, Hendricks, D, Waldherr, R, Hamprecht, F A, Delorme, S, Bachert, P and Ikinger, U (2007). Comparison of correctness of manuel and automatic evaluation of MR-spectrum with prostrate cancer. Der Urologe. 46 1252
Garbe, C S, Schnörr, C and Jähne, B (2007). Fluid flow estimation through integration of physical flow configurations. Proceedings of the 29th DAGM Symposium on Pattern Recognition. Springer. 92--101
Menze, B H, Kelm, B Michael and Hamprecht, F A (2007). From eigenspots to fisherspots -- latent spaces in the nonlinear detection of spot patterns in a highly variable background. Advances in data analysis. Springer. 33 255-262PDF icon Technical Report (248.87 KB)
Schmähling, J and Hamprecht, F A (2007). Generalizing the Abbott-Firestone curve by two new surface descriptors. Wear. 262 1360-1371PDF icon Technical Report (877.34 KB)

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